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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SMAD3_HUMAN) | B 1 (C) | polymer(polypeptide(L)) [188 aa] | Mothers against decapentaplegic homolog 4 :SMAD4_HUMAN | |
2 | b | E 1 (D) | polymer(polypeptide(L)) [91 aa] | Ski-like protein :SKIL_HUMAN | 289H 310D 311S(H) 320C(L) 324Y(A) 326W(R) 330T(A) 331V 332C(H) 333K 334I 335P(Y) 336P 337G(S) 382A(P) 383E(D) 384Y (identity: 41.2 %/49.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5c4v_B_1 identity=49.2% |
queryA 229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325 :* **** * * ***** * * **** *** ***** **** * * * * *** ** * * * * **** * **** *: 5c4v_B_1 29:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 128 SecStr : SEEEEEEEEETTEE S EEEETT EEEEESS BTTEEE TT TT HHHHHHHTTTTT EEEEEETTTEEEEE SSS EEEE HHHHHHTT: ExpBur :beebbbbbbbbeeeebeeebebeeebeebbbbeeeeeeeeeebbbeebebeeeeeebeebbeebeebbbbbeeeeebbebebebeebbbbbbebbbeeee: Contact : b bb b b queryA 326:WHPA-TVCKIPPGCNLKIFNNQE----------------------------------FAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVT: 390 : * * ** * * * * * * * ********* * ** : 5c4v_B_1 129:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDLRRLCILRMSFVKGWGPDYPRQSIK: 228 SecStr : TTS EEE TT EEEEE HHHHHHHHHHHHH ------------------------------------ HHHHGGGEEEEEES STTSS SSGG: ExpBur :eeeeeeebebeeeeeebbbbbbbbeeebeeeeeeee------------------------------------eeebeebbbbebbbbebbbeeeeeeebe: Contact :b bbbbbbbbb bbb queryA 391:STPCWIELHLNGPLQWLDKVL: 411 : ****** ** ** ** **: 5c4v_B_1 229:ETPCWIEIHLHRALQLLDEVL: 249 SecStr :GSSSEEEEEEHHHHHHHHHHH: ExpBur :ebbbbbbbebeebeebbeebe: |