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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SMAD3_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [236 aa] | SMAD4 :SMAD4_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [242 aa] | SMAD4 :SMAD4_HUMAN | 241N(D) 246E 247T 357N(A) 358Q(A) 359G 364Y(D) 367T(R) 371T(I) 390T(K) 397E 399H 401N(H) 404L 405Q 407L 408D 411L 412T(H) (identity: 52.6 %/50.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1g88_C_1 identity=50.3% |
queryA 229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325 :* **** * * ***** * * **** *** ***** **** * * * * *** ** * * * * **** * **** *: 1g88_C_1 36:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 135 SecStr : SEEEEEEEEETTEE S EEEETT SEEEEESS SSEEE SS TT HHHHHHHHTTTT EEEEEETTTEEEEEE SSS EEEE HHHHHHTT: ExpBur :beebbbbbbbbeeeebeeebebeeebeebebbeeeeeeeeeebbbeebebeebeeebeebbeebeebbebbbeeebebebebebeebbbbbbebbbeeee: Contact : b bb queryA 326:WHPA-TVCKIPPGCNLKIFNNQE-----------------------------------FAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTV: 389 : * * ** * * * * * * * * * * ********* * * : 1g88_C_1 136:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVXXXXXXXXXXXXXAPAISLSAAAGI-GVDDLRRLCILRMSFVKGWGPDYPSQSI: 234 SecStr : TT EEEE TT EEEEE HHHHHHHHHHHHHHHHHHHHHHHTT ------------- SS B TTT-THHHHHHTTEEEEESS STTSS SG: ExpBur :beeeebbbbbeeebebebbbbebbeeebeeebeebeeebeeebeee-------------eeeeeeeeeeee-eeeebeebbbbebbbbebbbeeeebeeb: Contact : bbb b b b queryA 390:TSTPCWIELHLNGPLQWLDKVLTQM: 414 : ****** ** ** ** ** *: 1g88_C_1 235:KETPCWIEIHLHRALQLLDEVLHTM: 259 SecStr :GGSSSEEEEEEHHHHHHHHHHHTTS: ExpBur :eebbbbbbbebebbeebbeebeeee: Contact :b b b b bb bb bb |