Protein Model on 7tdu_A_1_B_1
(TEMPLATE: 
7tdu
)Protein Model on 7tdu_A_1_B_1
(TEMPLATE: 7tdu
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase :R1AB_SARS2 | |
| 2 | b | B 1 (A) | non-polymer(I1W) | (1R,2S,5S)-N-{(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxo(1-~2~H)pyrrolidin-3-yl]propan-2-yl}-3-{N-[tert-butyl(~2~H)carbamoyl]-3-methyl-L-(N-~2~H)valyl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-(~2~H)carboxamide | 3265T 3267L 3281H 3282V 3284C 3289M 3380F 3381L 3382N 3383G 3384S 3385C 3403H 3404H 3405M 3406E 3407L 3408P 3412H 3427D 3428R 3429Q 3430T 3432Q (identity: 100.0 %/96.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7tdu_A_1 identity=96.1% |
queryA 3241:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK:3340
:********************************** ********** ****************** ******************** * ***** ******:
7tdu_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTTSSS HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbebbbeeeebbbbbbeebbbbbebbbbeeeeeeebebeebbeeeeeeebebebeeeebebebeebeebbbebebeeebeeebe:
Contact : b b bb b b
queryA 3341:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI:3440
:********************************* ********************************************* ********************:
7tdu_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeeebbbbbbebebbeebebeeeeeebeeebeb:
Contact : bbbbbb bbbbbb b bbbb b
queryA 3441:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540
:* **************************************************************** ***************** **************:
7tdu_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHH HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebbeeeebeeeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeebeebebbbbbebbebbe:
queryA 3541:SGVTFQ:3546
:******:
7tdu_A_1 301:SGVTFQ: 306
SecStr :HT :
ExpBur :eeeeee:
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[assembly_id:1]
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