[pdbjlvh2]Protein Model on 7skq_A_1_B

Protein Model on 7skq_A_1_B_1 (TEMPLATE: 7skq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [313 aa]	3C-like proteinase :Q0QDZ2_SARS
2	b		B 1 (B)	polymer(polypeptide(L)) [304 aa]	3C-like proteinase :Q0QDZ2_SARS	1579A 1580D 1587H 1589N 1593K 1629H 1632K 1634K 1646W 1647A 1648D 1649N 1698T 1701E 1805T 1807N 1810C 1812H 1826D 1829H (identity: 100.0 %/97.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7skq_A_1 identity=97.4%

queryA      1542:VKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGL:1641
                :**************************** ************* *********************************************************:
7skq_A_1       6:VKTIKVFTTVDNTNLHTQLVDMSMTYGQHFGPTYLDGADVTKVKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGL: 105
SecStr          :  EEEEEEESSSSSEEEEEEETTS HHHHHSSEEETTEE SS    GGGTT EEEE  TT TTTGGGHHHH    TTHHHHHHHHHHHHTTS   EETTE:    
ExpBur          :eeebebbbbeebeeeeeeebebeebbeeeeeebbbbbeebeeeebeeebeeeebbbbeeeeeeeeebeeebeeeeebbbbbbbbbbbebeebebeebeeb:    
Contact         :                                     bb      b b   b                                   b  b b       

queryA      1642:TSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTG:1741
                :********* *********** *************************************************************** ************ *:
7skq_A_1     106:TSIKWADNNUYLSSVLLALQQIEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNLVCKHCGQKTTTLMG: 205
SecStr          :E     SSTHHHHHHHHHHTTS   BSSHHHHHHHHHHHHT  HHHHHHHHHHTT  TT    HHHHHHHHHTTB  TT EEEEEEEETTTEEEEEEEEG:    
ExpBur          :bbbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbbbbbbbbbbbeeebeebbebeebbeebbebbebeebebbbbeebeeeeeeeeeeeb:    
Contact         :    bbbb                                                b  b                                        

queryA      1742:VEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVT:1841
                :************* ** ***********************************************************************************:
7skq_A_1     206:VEAVMYMGTLSYDELKAGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVT: 305
SecStr          :GGGTEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEEETTEEEEEEEEESSSEEEEETTEEEEES EEEEEE:    
ExpBur          :bebbbbeebbbbeebeeebeeebeeeeebebbbeebebebbbbbbeeeeeebeeeebebbbbbeeeeeebebbbbbbeeebbebebeeeeeeeebebebb:    
Contact         :                                                               b b  b b             b  b            

queryA      1842:DVFYKETSYTTTI:1854
                :*************:
7skq_A_1     306:DVFYKETSYTTTI: 318
SecStr          :EEEEE S EE   :    
ExpBur          :bbbbebeebebee:

Protein Model on 7skq_A_1_B_1 (TEMPLATE: 7skq )

Input Residue Numbers for Focused Sites