[pdbjlvh2]Protein Model on 7lfu_A_1_B

Protein Model on 7lfu_A_1_B_1 (TEMPLATE: 7lfu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	A 1 (D)	polymer(polypeptide(L)) [306 aa]	papain-like protease :R1A_SARS
2	b		B 1 (A)	polymer(polypeptide(L)) [5 aa]	Papain-like protease peptide inhibitor VIR250	1649N 1651C 1652Y 1702L 1703G 1704D 1707E 1787P 1788P 1804Y 1808Y 1809Q 1810C 1811G 1812H 1813Y (identity: 100.0 %/99.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7lfu_A_1 identity=99.0%

queryA      1544:TIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTS:1643
                :****************************************************************************************************:
7lfu_A_1       5:TIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTS: 104
SecStr          : EEEEEESSSS  EEEEE TTS HHHHHSSEEETTEE TTS   GGGTT EEEE   SHHHHHHHHHHH    HHHHHHHHHHHHHHTTS   EETTEE :    
ExpBur          :ebebbbbbbeeeeeeeebeeeebbeeebeebbbebeebbeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebbebbb:    

queryA      1644:IKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVE:1743
                :****************************************************************************************************:
7lfu_A_1     105:IKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVE: 204
SecStr          :  S SS HHHHHHHHHHTTS   BSSHHHHHHHHHHTTT  HHHHHHHHHHTT  TT    HHHHHHHHGGGB  TT EEEEEEE TTS SEEEEEEGGG:    
ExpBur          :beeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbebeeeeeeebeebbeebbebbebeebebbbbbebeeeeeeeeeeeebe:    
Contact         :     b bb                                                 bbb  b                                    

queryA      1744:AVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDV:1843
                :********************   *****************************************************************************:
7lfu_A_1     205:AVMYMGTLSYDNLKTGVSIPXXXGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDV: 304
SecStr          :GSEEES S HHHHHH EE  ---    EEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEEE:    
ExpBur          :bbbbeebbbbeebeeebeee---eeebebebeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbbeebbbebbbeeeeebeebebebbbb:    
Contact         :                                           bb               b   bbbbbb                              

queryA      1844:FYKETSYTT:1852
                :*********:
7lfu_A_1     305:FYKETSYTT: 313
SecStr          :EEE SEEE :    
ExpBur          :bbebeeeee:

Protein Model on 7lfu_A_1_B_1 (TEMPLATE: 7lfu )

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