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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [298 aa] | 3C-like proteinase :R1A_CVHSA | |
2 | b | C 1 (A) | non-polymer(FNO) | 2-[(1R)-4-methyl-1-oxidanyl-pent-3-enyl]-5,8-bis(oxidanyl)naphthalene-1,4-dione | 3279P 3281H 3385C 3404H 3405M 3427D 3428R 3429Q (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7eo8_A_1 identity=100.0% |
queryA 3242:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY:3341 :****************************************************************************************************: 7eo8_A_1 2:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY: 101 SecStr : THHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG GGGSSS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT EE: ExpBur :eeeeeeeebeebeebbbbbbbeebebbbbbbeebbbbbbebbbeeeeeeeeebeebbeebeeeebebebeeeebbbeeeeeeebbbebebeeebeeebee: Contact : b b queryA 3342:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT:3441 :****************************************************************************************************: 7eo8_A_1 102:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT: 201 SecStr :EE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B H: ExpBur :eeeebeebbbbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbebbbbbbbebeeebbbbbbbebebbeebebbeeebeeeeeeebb: Contact : b bb bbb queryA 3442:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQ:3539 :**************************************************************************************************: 7eo8_A_1 202:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQ: 299 SecStr :HHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHH : ExpBur :bbbbbbbbbbbeeeeeebeeeeeeeeeebeebbeeeebeebeeeeeeebeebeeebebebbebbbbbbbbbeeebeebebbeeeebebbbbbebbeee: |