[pdbjlvh2]Protein Model on 7b2j_A_1_B

Protein Model on 7b2j_A_1_B_1 (TEMPLATE: 7b2j )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [305 aa]	3C-like proteinase nsp5 :R1AB_SARS2
2	b		B 1 (A)	non-polymer(SQ2)	2-(1H-1,2,3-benzotriazol-1-yl)-1-(4-methylpiperidin-1-yl)ethan-1-one	3281H 3289M 3294Y 3380F 3381L 3382N 3385C 3403H 3404H 3405M 3406E 3427D 3428R 3429Q (identity: 100.0 %/96.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7b2j_A_1 identity=96.1%

queryA      3241:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK:3340
                :********************************** ********** ****************** ******************** * ***** ******:
7b2j_A_1       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTTTTS  HHHHHHT  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT  E:    
ExpBur          :eebeeeebebeebeebbbebbbeeeebbbbbbeebbbbbbbbbbeeebeeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:    
Contact         :                                        b       b    b                                              

queryA      3341:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI:3440
                :********* *********************** ********************************************* ********************:
7b2j_A_1     101:YKFVRIQPGXTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE      - EEEEEEETTEEEEEEEE   TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT  SSSS        B :    
ExpBur          :eeeeebeee-bbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:    
Contact         :                                       bbb  b                 bbbb                    bbb           

queryA      3441:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540
                :* **************************************************************** *****************  **************:
7b2j_A_1     201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHHHT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHH   HHHHHHHHHHHHHH  TT  BTTBSS      HHHHHHHH:    
ExpBur          :bbbbbbbbbbbbeeeeeebeeeeebeeeebeebbeeeebeebeeeebeebeebbeeeebebeebbbbbbebbeeebeeeebeebeebebbbbbebbebee:    

queryA      3541:SGVTF:3545
                :*****:
7b2j_A_1     301:SGVTF: 305
SecStr          :HT   :    
ExpBur          :eeeee:

Protein Model on 7b2j_A_1_B_1 (TEMPLATE: 7b2j )

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