CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (AA) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase :R1AB_SARS2 | |
2 | b | B 1 (AA) | non-polymer(CB1) | 5-(AZIRIDIN-1-YL)-2,4-DINITROBENZAMIDE | 3289M 3404H 3405M 3406E 3407L 3408P 3427D 3428R 3429Q 3430T 3432Q (identity: 100.0 %/96.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ak4_A_1 identity=96.1% |
queryA 3241:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK:3340 :********************************** ********** ****************** ******************** * ***** ******: 7ak4_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT E: ExpBur :eebeeeebebeebeebbbebbbeeeebbbbbbeeebbbbebbbbeeebbeebebeebbeebeeeebebebeeeebebeeeeeeebbbebebeeebeeebe: Contact : b queryA 3341:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI:3440 :********************************* ********************************************* ********************: 7ak4_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200 SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS B : ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeebbbbbbbbbbeebbbbbbbbbbbebeeeebbbbbbebebbeebebeeeebeeeeeeeb: Contact : bbbbb bbbb b queryA 3441:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540 :* **************************************************************** ***************** **************: 7ak4_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300 SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHH: ExpBur :bbbbbbbbbbbbeeeeeebeeeeebebeebbebbeeeebbebeeebbeebeebbeebebebeebbbbbbbbbeeebeeeebbebeebbbbbbbebbebbe: queryA 3541:SGVTFQ:3546 :******: 7ak4_A_1 301:SGVTFQ: 306 SecStr :HT : ExpBur :eeeeee: |