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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | B 1 (B) | polymer(polypeptide(L)) [303 aa] | Replicase polyprotein 1a :R1A_CVHSA | |
2 | b | E 1 (B) | non-polymer(QYS) | (1S,2S)-2-[(N-{[(4,4-difluorocyclohexyl)methoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid | 3281H 3289M 3380F 3382N 3383G 3384S 3385C 3403H 3404H 3405M 3406E 3408P 3412H 3427D 3428R 3429Q 3430T 3431A (identity: 100.0 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6w2a_B_1 identity=99.7% |
queryA 3240:QSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTP:3339 : ***************************************************************************************************: 6w2a_B_1 7:HSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTP: 106 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG GGGSSS HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEESS TT : ExpBur :eeebeeeeeebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebbeeeeebebeeeeeeebbbbbebeeebeebb: Contact : b b queryA 3340:KYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTT:3439 :****************************************************************************************************: 6w2a_B_1 107:KYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTT: 206 SecStr :EEEE TT EEEEEEEETTEEEEEEEEEB TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B: ExpBur :eeeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbebeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebe: Contact : b bbbb bbbb b b bbbbb queryA 3440:ITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQ:3539 :****************************************************************************************************: 6w2a_B_1 207:ITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQ: 306 SecStr : HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHT: ExpBur :bbbbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeeeeebeebbeeeebebeebbbbbbebbeeebeeeebbeeeebebbbbbeebeee: queryA 3540:CSG:3542 :***: 6w2a_B_1 307:CSG: 309 SecStr :S : ExpBur :eee: |