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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [317 aa] | Replicase polyprotein 1ab :R1AB_CVHSA | |
2 | b | G 1 (A) | non-polymer(ACT) | ACETATE ION | 1645K 1646W 1826D 1827G 1828A 1829H (identity: 100.0 %/99.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5e6j_A_1 identity=99.1% |
queryA 1543:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT:1642 :****************************************************************************************************: 5e6j_A_1 4:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT: 103 SecStr : EEEEEEESSSS EEEEEESSS GGGTTSSEEETTEE SSS GGGTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS B SSSB: ExpBur :eebebebbbbeeeeeeeebeeeebbeeebeebbbeeeebbeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb: queryA 1643:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV:1742 :****************************************************************************************************: 5e6j_A_1 104:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV: 203 SecStr : S TTTHHHHHHHHHHHTS BSSHHHHHHHHHHHHT HHHHHHHHHHTT TT HHHHHHHHHTTB TT EEEEEEE SSS EEEEEEEGG: ExpBur :bbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbbbbbbbbbbbebeeeeeeebeebbeebbebbebeebebbbbeebeeeeeeeeeeeeb: Contact : bb queryA 1743:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD:1842 :****************************************************************************************************: 5e6j_A_1 204:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD: 303 SecStr :GGSEEES S SHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE GGG SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEE: ExpBur :ebbbbeebbbbeebeeeeeeeeeeebebebbbeebebebbbbbbeeeeeebeeeebbbbbbbeeeeeebebbbbbbeeebbebebeeeeeeeebebbbbb: Contact : bbbb queryA 1843:VFYKETSYTTTIKPVSY:1859 :************** : 5e6j_A_1 304:VFYKETSYTTTIKPLEH: 320 SecStr :EEEE S B : ExpBur :bbbebeebeeeeeeeee: |