[pdbjlvh2]Protein Model on 4ow0_A_1_D

Protein Model on 4ow0_A_1_D_1 (TEMPLATE: 4ow0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [312 aa]	papain-like protease :R1A_CVHSA
2	b		D 1 (A)	non-polymer(S88)	N-[(3-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamide	1702L 1703G 1704D 1787P 1788P 1804Y 1808Y 1809Q 1813Y 1841T (identity: 100.0 %/99.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4ow0_A_1 identity=99.7%

queryA      1543:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT:1642
                :****************************************************************************************************:
4ow0_A_1       4:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT: 103
SecStr          : EEEEEEESSSSS EEEEEESSS SHHHHSSEESSS  GGGS   SS TT EEEE   SHHHHHHHHHHH    TTHHHHHHHHHHHHTTS   EETTEE:    
ExpBur          :eebebebbbbeeeebeeebeeeebbeeebeebbeebeebeeeebeeebeeebbbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb:    

queryA      1643:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV:1742
                :******** *******************************************************************************************:
4ow0_A_1     104:SIKWADNNUYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV: 203
SecStr          :     TTTHHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TT    HHHHHHHHHTTBS TT EEEEEEE SSS EEEEEEETH:    
ExpBur          :bbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbeeebeeebebeebbeebbebbebeebebbbeeebeeeeeeeeebeee:    
Contact         :                                                           bbb                                      

queryA      1743:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD:1842
                :****************************************************************************************************:
4ow0_A_1     204:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD: 303
SecStr          :HHHEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEESEEEEEEEE:    
ExpBur          :ebbbbeebbbbeebbebbeeebeeeeebebbbbebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeeebbebebeeeeebeebebebbb:    
Contact         :                                            bb               b   bb   b                           b 

queryA      1843:VFYKETSYTTTI:1854
                :************:
4ow0_A_1     304:VFYKETSYTTTI: 315
SecStr          :EEEE SEEE   :    
ExpBur          :bbbebeebeeee:

Protein Model on 4ow0_A_1_D_1 (TEMPLATE: 4ow0 )

Input Residue Numbers for Focused Sites