[pdbjlvh2]Protein Model on 4m0w_A_1_B

Protein Model on 4m0w_A_1_B_1 (TEMPLATE: 4m0w )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [317 aa]	Replicase polyprotein 1a :R1A_CVHSA
2	b		B 1 (B)	polymer(polypeptide(L)) [76 aa]	Ubiquitin :RS27A_BOVIN	1646W 1649N 1650N 1651C(S) 1652Y 1702L 1703G 1704D 1706R 1707E 1739L 1743E 1747Y 1748M 1763P 1765V 1772Q 1787P 1788P 1804Y 1808Y 1809Q 1810C 1811G 1813Y 1841T (identity: 96.2 %/99.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4m0w_A_1 identity=99.7%

queryA      1542:VKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGL:1641
                :****************************************************************************************************:
4m0w_A_1       3:VKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGL: 102
SecStr          :  EEEEEEESSSSS EEEEEETTS HHHHTSSEEETTEE TTS   GGGTT EEEE   SHHHHHHHHHHH    TTHHHHHHHHHHHHTTS   EETTE:    
ExpBur          :eeebebebbbbeeeeeeeebbeeeebeeebeebbbebeebbeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeeb:    

queryA      1642:TSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTG:1741
                :********* ******************************************************************************************:
4m0w_A_1     103:TSIKWADNNSYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTG: 202
SecStr          :E   S TT HHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHHT  TT    HHHHHHHHHTTB  TT EEEEEEEETTTEEEEEEEEG:    
ExpBur          :bbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbebebeeeeebeebbeebbebbebeebebbbbebbeeeeeeeeeeee:    
Contact         :    b  bbbb                                                 bbb bb                               b  

queryA      1742:VEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVT:1841
                :****************************************************************************************************:
4m0w_A_1     203:VEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVT: 302
SecStr          :GGGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SS EEEEEEEESSSEEEEETTEEEEESEEEEEEE:    
ExpBur          :bebbbbeebbbbeebbeebeeebeeeeebebbbeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeebbbebebeeeeebeebebbbb:    
Contact         : b   bb              b b      b              bb               b   bbbb b                           b

queryA      1842:DVFYKETSYTTTIKPVS:1858
                :*****************:
4m0w_A_1     303:DVFYKETSYTTTIKPVS: 319
SecStr          :EEEEE SEEE       :    
ExpBur          :bbbbebeeeebeeeeee:

Protein Model on 4m0w_A_1_B_1 (TEMPLATE: 4m0w )

Input Residue Numbers for Focused Sites