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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [312 aa] | Replicase polyprotein 1a :R1A_CVHSA | |
2 | b | E 1 (B) | non-polymer(GRM) | N-(1,3-benzodioxol-5-ylmethyl)-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamide | 1748M 1749G 1787P 1808Y (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3mj5_A_1 identity=100.0% |
queryA 1543:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT:1642 :****************************************************************************************************: 3mj5_A_1 4:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT: 103 SecStr : EEEEEESSSSS EEEEE TTS HHHHTSSEEETTEE SS TT TT EEEE SHHHHHHHHHHH TTHHHHHHHHHHHHTTS EETTEE: ExpBur :eebebebbbbeeeeeeeebeeeebbeeebeebbbebeebeeeebeeebeeeebbbebeeeebeebbeebbebeeeebbbebbebbeebeebebeebeebb: queryA 1643:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV:1742 :****************************************************************************************************: 3mj5_A_1 104:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV: 203 SecStr : TTTHHHHHHHHHHTTS BSSHHHHHHHHHHTTT HHHHHHHHHHTT TTS HHHHHHHHHTTB TT EEEEEEEETTTEEEEEEEETH: ExpBur :bbeeeeebbbbbbbbbbbbebebebebebbeebbeebeeeebbbbbbbbbbbbeeeeeeebebeebbeebbebbebeebebbbbeebeeeeeeeeebeeb: queryA 1743:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD:1842 :****************************************************************************************************: 3mj5_A_1 204:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD: 303 SecStr :HHHEEES S HHHHHH EEEEETTTEEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEESEEEEEEEE: ExpBur :ebbbbeebbbbeebeeebeeebeeeeebebbbbebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeebbbebebeeeeeeeebebbbbb: Contact : bb b b queryA 1843:VFYKETSYTTTI:1854 :************: 3mj5_A_1 304:VFYKETSYTTTI: 315 SecStr :EEEE SEEE : ExpBur :bbbebeeeeeee: |