Protein Model on 3iwm_A_1_C_1
(TEMPLATE: 
3iwm
)Protein Model on 3iwm_A_1_C_1
(TEMPLATE: 3iwm
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase :R1A_CVHSA | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [300 aa] | 3C-like proteinase :R1A_CVHSA | 3243F 3244R 3245K 3246M 3248F 3351T 3367Q 3368C 3369A 3371R 3377K 3438T 3439T 3440I 3441T 3442L 3443N 3444V 3445L 3446A 3447W 3448L 3449Y 3450A 3451A 3452V 3453I 3456D 3458W 3459F 3460L 3461N 3462R 3463F 3478N 3479Y 3480E 3482L 3486H 3489I 3490L 3493L 3494S 3496Q 3497T 3499I 3500A 3501V 3504M 3505C 3506A 3508L 3510E 3511L 3516M 3519R 3520T 3521I 3522L 3524S 3526I 3527L 3528E 3529D 3530E 3531F 3532T 3533P 3535D 3536V 3538R 3539Q (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3iwm_A_1 identity=100.0% |
queryA 3241:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK:3340
:****************************************************************************************************:
3iwm_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 100
SecStr : THHHHTTEEEEESSS EEEEEEETTEEEEEGGGS TTTTTS HHHHHTT TTS BBSSS B B EETTEE B SS TT S:
ExpBur :eeeeeeeeeeeebeebbbebbbeeeebbbbbbeebbbbbbebbbeeebeeebebeebbeeeeeeebebbbeeeebebebeeebebbbebebeeebeebee:
Contact : bbbb b
queryA 3341:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI:3440
:****************************************************************************************************:
3iwm_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EE TT EEEEEEEETTEEEEEEEEEB TTS B SS TT EEEEEETTEEEEEEEE TTS B EE TTS BSSS SSSS :
ExpBur :eebeebeebeebbbbbbeebeeeeeebbbbbebebbeeebeeebbbbbbbbeeeebbbbbbbbbbebeeebbbbbbbebebbeebebbeeebeeeeeeeb:
Contact : b bbb b b bbb
queryA 3441:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540
:****************************************************************************************************:
3iwm_A_1 201:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 300
SecStr :SHHHHHHHHHHHHTT TTTS HHHHHHHHHHTT HHHHHHHHHHHHHTS HHHHHHHHTTHHHH TT BTTBSS HHHHHHT :
ExpBur :eeeeeeeeebbeeeeeeeeeeeeebeeeebeebbeeeeeeebeeeebeeeeeebeeeeeebeeebbeebeebeeebeeeeeeebeeeeeeeeeeeeeeee:
Contact :bbbbbbbbbbbbb b bbbbbb bbb b b bb bb bb bbb bbb b bb b bbbb b bbbbbbbb bb bb
queryA 3541:S:3541
:*:
3iwm_A_1 301:S: 301
SecStr : :
ExpBur :e:
|
[assembly_id:1]
[help]