[pdbjlvh2]Protein Model on 3e9s_A_1_D

Protein Model on 3e9s_A_1_D_1 (TEMPLATE: 3e9s )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [317 aa]	Non-structural protein 3 :R1A_CVHSA
2	b		D 1 (A)	non-polymer(CL)	CHLORIDE ION	1667F 1673Q (identity: 100.0 %/99.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3e9s_A_1 identity=99.7%

queryA      1541:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG:1640
                :****************************************************************************************************:
3e9s_A_1       4:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG: 103
SecStr          :S  EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TTS   GGGTT EEEE   SHHHHHHHHHHH    TTHHHHHHHHHHHHTTS   EETT:    
ExpBur          :eeeebebbbbbbeeeeeeeebebeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbbbbebbeebeebebeebee:    

queryA      1641:LTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT:1740
                :********** *****************************************************************************************:
3e9s_A_1     104:LTSIKWADNNUYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT: 203
SecStr          :EE     TT HHHHHHHHHHHTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TTS   HHHHHHHHHTTB  TT EEEEEEE SSS EEEEEEE:    
ExpBur          :bbbbeeeeebbbbbbbbbbbbebebebebebbeebbeebeeeebbbbbbbbbbbbebebeebbebeebbeebbebbebeebebbbbbebeeeeeeeeeee:    
Contact         :                          b     b                                                                   

queryA      1741:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV:1840
                :****************************************************************************************************:
3e9s_A_1     204:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV: 303
SecStr          :THHHHEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEE S  EEEE TTS SEEEEEESSTTSSEEEEEEESSSEEEEETTEEEEES EEEEE:    
ExpBur          :ebebbbbeebbbbeebeeebeeebeeeeebebbbbebebbbbbbbbeeeeeebeeeebebbbbbeeeeeebebbbbbeeebbbebebeeeeeeeebebbb:    

queryA      1841:TDVFYKETSYTTTI:1854
                :**************:
3e9s_A_1     304:TDVFYKETSYTTTI: 317
SecStr          :EEEEEE S EE   :    
ExpBur          :bbbbbebeeeebee:

Protein Model on 3e9s_A_1_D_1 (TEMPLATE: 3e9s )

Input Residue Numbers for Focused Sites