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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [317 aa] | Non-structural protein 3 :R1A_CVHSA | |
2 | b | B 1 (A) | non-polymer(TTT) | 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide | 1702L 1703G 1704D 1787P 1788P 1804Y 1808Y 1809Q 1813Y 1841T (identity: 100.0 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3e9s_A_1 identity=99.7% |
queryA 1541:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG:1640 :****************************************************************************************************: 3e9s_A_1 4:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG: 103 SecStr :S EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TTS GGGTT EEEE SHHHHHHHHHHH TTHHHHHHHHHHHHTTS EETT: ExpBur :eeeebebbbbbbeeeeeeeebebeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbbbbebbeebeebebeebee: queryA 1641:LTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT:1740 :********** *****************************************************************************************: 3e9s_A_1 104:LTSIKWADNNUYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT: 203 SecStr :EE TT HHHHHHHHHHHTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TTS HHHHHHHHHTTB TT EEEEEEE SSS EEEEEEE: ExpBur :bbbbeeeeebbbbbbbbbbbbebebebebebbeebbeebeeeebbbbbbbbbbbbebebeebbebeebbeebbebbebeebebbbbbebeeeeeeeeeee: Contact : bbb queryA 1741:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV:1840 :****************************************************************************************************: 3e9s_A_1 204:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV: 303 SecStr :THHHHEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEE S EEEE TTS SEEEEEESSTTSSEEEEEEESSSEEEEETTEEEEES EEEEE: ExpBur :ebebbbbeebbbbeebeeebeeebeeeeebebbbbebebbbbbbbbeeeeeebeeeebebbbbbeeeeeebebbbbbeeebbbebebeeeeeeeebebbb: Contact : bb b bb b queryA 1841:TDVFYKETSYTTTI:1854 :**************: 3e9s_A_1 304:TDVFYKETSYTTTI: 317 SecStr :EEEEEE S EE : ExpBur :bbbbbebeeeebee: Contact :b |