[pdbjlvh2]Protein Model on 3d62_A_1_B

Protein Model on 3d62_A_1_B_1 (TEMPLATE: 3d62 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [299 aa]	3C-like proteinase :R1AB_CVHSA
2	b		B 1 (A)	non-polymer(959)	benzyl (2-oxopropyl)carbamate	3281H 3289M 3382N 3383G 3384S 3385C 3404H 3405M 3428R 3429Q (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3d62_A_1 identity=100.0%

queryA      3243:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK:3342
                :****************************************************************************************************:
3d62_A_1       1:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK: 100
SecStr          :        HHHHTTEEEEEETTEEEEEEEETTEEE BGGGS  GGGSSS  HHHHHHH  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT   EE:    
ExpBur          :eeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebebeeeebebeeeeebebbbebebeeebeeebeee:    
Contact         :                                      b       b                                                     

queryA      3343:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL:3442
                :****************************************************************************************************:
3d62_A_1     101:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL: 200
SecStr          :E    TT EEEEEEESSSSEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SS S        B HH:    
ExpBur          :eeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbebeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebbbbe:    
Contact         :                                       bbbb                  bb                      bb             

queryA      3443:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS:3541
                :***************************************************************************************************:
3d62_A_1     201:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS: 299
SecStr          :HHHHHHHHHHHTT  TT  S    STTHHHHHHHTTB    HHHHHTTHHHHHHHT  HHHHHHHHHHHHHT   S  SSS SS      SHHHHTT  :    
ExpBur          :bbbbbbbbbbeeeeeebebeeebebeebeebbeeeebeebeeeebeebeebbeeeeeebeebbbbbeebbeeeeeeeebeeeeeebbbbbbebbeeeee:

Protein Model on 3d62_A_1_B_1 (TEMPLATE: 3d62 )

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