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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [300 aa] | SARS CORONAVIRUS MAIN PROTEINASE :A7J8L3_CVHSA | |
2 | b | D 1 (A) | non-polymer(BEZ) | BENZOIC ACID | 3281H 3289M 3404H 3405M 3426V 3427D 3428R 3429Q (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2vj1_A_1 identity=100.0% |
queryA 3242:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY:3341 :****************************************************************************************************: 2vj1_A_1 1:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY: 100 SecStr : S HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG HHHHHS HHHHHHH GGGEEEEETTEEE EEEEEEETTEEEEEESS TT EE: ExpBur :beeeeebebeebeebbbebbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeeebeebeeeebebebeeeebebeeeeeeebbbebebeeebeeebee: Contact : b b queryA 3342:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT:3441 :****************************************************************************************************: 2vj1_A_1 101:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT: 200 SecStr :EE TT EEEEEEEETTEEEEEEEEEB TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SS S B H: ExpBur :eeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeebbebb: Contact : bb bbbb queryA 3442:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS:3541 :****************************************************************************************************: 2vj1_A_1 201:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS: 300 SecStr :HHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHH HHHHHHHHHHHHHH TT BTTBSS S HHHHHHTT : ExpBur :bbbbbbbbbbbeeeeeebeeeeebebeebbebbeeeebeebeeeebeebeebbeeeebebeebbbbbbebbeeebeeeebbebeebbbbbbbebbeeeee: |