[pdbjlvh2]Protein Model on 2gtb_A_1_C

Protein Model on 2gtb_A_1_C_1 (TEMPLATE: 2gtb )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [299 aa]	3C-like proteinase :R1AB_CVHSA
2	b		C 1 (A)	non-polymer(ACY)	ACETIC ACID	3245K 3247A 3365V 3366Y 3367Q (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2gtb_A_1 identity=100.0%

queryA      3242:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY:3341
                :****************************************************************************************************:
2gtb_A_1       3:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY: 102
SecStr          :         HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  GGGSSS  HHHHHHT  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT  SE:    
ExpBur          :ebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeeeeebebeeebeebeeeebebeeeeeebebebeeebebbbebebeeebeeebee:    
Contact         :   b b                                                                                              

queryA      3342:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT:3441
                :****************************************************************************************************:
2gtb_A_1     103:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT: 202
SecStr          :EE    TT EEEEEEEETTEEEEEEEEEB TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SSSS        B H:    
ExpBur          :eeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeeeeeeeeeebb:    
Contact         :                       bbb                                                                          

queryA      3442:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540
                :***************************************************************************************************:
2gtb_A_1     203:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 301
SecStr          :HHHHHHHHHHHHHT  TT  SS   HHHHHHHHHTTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHT  SS  BTTBSS   S  HHHHHHH :    
ExpBur          :bbbbbbbbbbbeeeeeebeeeeebeeeebbeebeeeebeebeeeebeebeebeeebebebeebbbbbbbbbeebbeeeebeeeeebbbbbbbebbeeee:

Protein Model on 2gtb_A_1_C_1 (TEMPLATE: 2gtb )

Input Residue Numbers for Focused Sites