[pdbjlvh2]Protein Model on 2d2d_A_1_C

Protein Model on 2d2d_A_1_C_1 (TEMPLATE: 2d2d )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [301 aa]	3C-like proteinase :R1AB_CVHSA
2	b		C 1 (A)	non-polymer(ENB)	ETHYL (2E,4S)-4-[((2R)-2-{[N-(TERT-BUTOXYCARBONYL)-L-VALYL]AMINO}-2-PHENYLETHANOYL)AMINO]-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENT-2-ENOATE	3266T 3267L 3281H 3289M 3380F 3381L 3382N 3383G 3384S 3385C 3403H 3404H 3405M 3406E 3408P 3412H 3427D 3429Q 3430T 3431A 3432Q (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2d2d_A_1 identity=100.0%

queryA      3243:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK:3342
                :****************************************************************************************************:
2d2d_A_1       8:FRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYK: 107
SecStr          :        HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTS SS  HHHHHHT  GGGEEEEETTEEE B   EEETTEEEEEBSS  TT  SEE:    
ExpBur          :eeeeebebeebebbbbbbbbeebebbbbbbeebbbbbbbbbbeeeeeeebebeebbeeeeeeebebeeeeeebebebeeeeebbbebebeeebeeebeee:    
Contact         :                       bb             b       b                                                     

queryA      3343:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL:3442
                :****************************************************************************************************:
2d2d_A_1     108:FVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITL: 207
SecStr          :E    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEE  TTS BEEE TTS BSSS  SSSS        B HH:    
ExpBur          :eeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeebbebbb:    
Contact         :                                     bbbbbb                 bbbb b   b              b bbbb          

queryA      3443:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSG:3542
                :****************************************************************************************************:
2d2d_A_1     208:NVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSG: 307
SecStr          :HHHHHHHHHHHHT  TT  S    HHHHHHHHHHTTB    HHHHHHHHHHHHHHT  HHHHHHHHHHHHHSTTTT  BTTBSS      HHHHHHHHTT:    
ExpBur          :bbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebbeeeebebeebbbbbbebbeeebeeeebbeeeebebbbbbebbebbeee:    

queryA      3543:V:3543
                :*:
2d2d_A_1     308:V: 308
SecStr          : :    
ExpBur          :e:

Protein Model on 2d2d_A_1_C_1 (TEMPLATE: 2d2d )

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