#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 8sqj_A_1_H_1

Protein Model on 8sqj_A_1_H_1 (TEMPLATE: 8sqj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [929 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b H 1 (O) polymer(polyribonucleotide) SARS-CoV-2 5' UTR 35F 37I 39N 41K 48F 49L 50K 51T 73K 74R 75H 208D 218D 221D 711D 713N 718K 721R (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8sqj_A_1 identity=100.0%
queryA         1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100
                :****************************************************************************************************:
8sqj_A_1       1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100
SecStr          :  HHHHHHHHHHGGG   B S  SSS S  S EEEEEE SS EEEEEE     EEEEEEETTTEEEEEEEEEEE  HHHHHHHHHHHHHHSS TTB  EE:    
ExpBur          :eeeeeebbeebbeeeebebbeebeeebeebeebbbbeeeeebbbbbebeeeebbbbebbeeeeeeebbbbbbeebeeeebeebeebbeebeebebbbebb:    
Contact         :                                  b b b b      bbbb                     bbb                         

queryA       101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200
                :****************************************************************************************************:
8sqj_A_1     101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200
SecStr          :EEEEEETTEEEEEEEEEEE SSBHHHHHHHHHS BTTB HHHHHHHHHTTSS GGGGGSS SS TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT:    
ExpBur          :bbebeeeeeebbbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbeebeebbebbbebbeebbebbeebbebbebbeebb:    

queryA       201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300
                :****************************************************************************************************:
8sqj_A_1     201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300
SecStr          :EEEE  GGGBBTT  B   TT EE  TT  EEE SHHHHHHHHHHHHTTGGGGGGBGGG TTS B    TT    HHHHHHHHHHHSTT  S   SSGGG:    
ExpBur          :bebebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeeeeeeeeebeebbeebbeebbebbebebbbbbee:    
Contact         :       b         b  b                                                                               

queryA       301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400
                :****************************************************************************************************:
8sqj_A_1     301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400
SecStr          :  SHHHHHHHHHHHHHHGGGS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEE  S    SB    HHHHHHHHHSSHHHHHTSEE   TT SS EEEE:    
ExpBur          :beebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeeeebbbebbbbeebeeeeebebeebebebebb:    

queryA       401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500
                :****************************************************************************************************:
8sqj_A_1     401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500
SecStr          :SSSS     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHGGGGG       HHHHHHHHHHHTTSSTTS      GGG   S SSS:    
ExpBur          :eeeeeeeeebeeeeebeebeebbeeeebeeeeeebeeebebeeeebebbbebbbebebbeebbbbbbbbbbbbbbbbbbbeebeebebebeebebeeeee:    

queryA       501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600
                :****************************************************************************************************:
8sqj_A_1     501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600
SecStr          :   TTGGGT  HHHHHHSS HHHHHHHHHHHTSS    EEEEEE    BSSSS  EEEE  HHHHHHHHHHHHHHHHHHTT SSSSB TT  STTTHHHH:    
ExpBur          :ebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbe:    

queryA       601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700
                :****************************************************************************************************:
8sqj_A_1     601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700
SecStr          :HHHHHHTT SSEEEEE   TTHHHH  HHHHHHHHHHHGGG TTT  HHHHHHHHHHHHHHTTS EEESSSEEEE  SS  TT TTHHHHHHHHHHHHHH:    
ExpBur          :bbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbeebeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbeebebbebbbbbbbbbbbb:    

queryA       701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800
                :****************************************************************************************************:
8sqj_A_1     701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800
SecStr          :HHHHHHHHTS STT   SHHHHHHHHHHHHHHT  S  TTTTTHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHHS    TTS E:    
ExpBur          :bbbbbbbbbbebeebeeeebeebbbebbebbbeeeeebeebbeebbebbeebbbbbbebeebbbbbbbebbeeebbbebebbbbbbbbbbbbbbeeeebb:    
Contact         :          b b    b  b                                                                               

queryA       801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900
                :****************************************************************************************************:
8sqj_A_1     801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900
SecStr          :EES GGG  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESSGGGG GGG SHHHHHHHHHHGGGGG SSTTTTHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeeeeebbeebeeeebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbeebbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeebe:    

queryA       901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :*****************************:
8sqj_A_1     901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :HSS    S   GGGTTSHHHHHGGGSTT :    
ExpBur          :eeeeeeeeeeeeeeebeeebbeebbeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123