[pdbjlvh2]Protein Model on 8gy6_A_1_F

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 8gy6_A_1_F_1

Protein Model on 8gy6_A_1_F_1 (TEMPLATE: 8gy6 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [859 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		F 1 (A)	non-polymer(GO3)	Gossypol	408Q 499D 500K 507N 543N (identity: 100.0 %/95.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8gy6_A_1 identity=95.2%

queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA: 130
                :********************                  ****** ***************************         *******************:
8gy6_A_1      31:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXYFVVKRXTFSNYQHEETIYNLLKDCPAVAKHDFFXXXXXXXXXPHISRQRLTKYTMADLVYA: 130
SecStr          : B    EESSS EE S  B ------------------      -  HHHHHHHHHHHHS  STTB   B  ---------   B  S  SSBHHHHHHH:    
ExpBur          :eebbbbeeeeebbbbbebee------------------eeeebe-eeeeeebbeebeeebeebebbbebeee---------eebbbeebbebbbbbbbbb:    

queryA       131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
                :****************************************************************************************************:
8gy6_A_1     131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
SecStr          :HHS  SSS HHHHHHHHHTTSS GGGTTSTTTT SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTEEEE  STTBBSS  B    SSEE  TT  :    
ExpBur          :bbbbebeebebbeebbbeeebbeeebbeeeebbbbbebeebeebbeebbeebbebbbbbbebbebbeebbbebebbbbbbbbbbbbbebbebeeeeeeeb:    

queryA       231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
                :****************************************************************************************************:
8gy6_A_1     231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
SecStr          : EE HHHHHHTGGGTTTTTGGGGGGBTTSSSSS B    TT    HHHHHHHHHHHTTT  S   SSGGGS SSTTHHHHHHHHHHHTSSS GGG EEEE:    
ExpBur          :ebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebeeebeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbeeee:    

queryA       331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
                :****************************************************************************************************:
8gy6_A_1     331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
SecStr          :  EEETTEEE  EEEEE SSS EEE S   S   S  HHHHHHHHTSSHHHHTSSEE   SS SS B EESSSS         B  HHHHHHHHHTT S :    
ExpBur          :eebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeeebebbeebbbbeeeeeeeebebeebeeebbbbeeeeeeeeebeebeebeebeebbeeeebee:    
Contact         :                                                                             b                      

queryA       431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
                :****************************************************************************************************:
8gy6_A_1     431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
SecStr          :TT SS    B     SS HHHHHGGGGG       TTTHHHHHHHHHHHTTTS      STTS   S SS   HHHHTT  HHHHHHHS HHHHHHHHHH:    
ExpBur          :eeeebeeeeebeeeeeebbbebbeebebbbebbbbbbbbbbbbbbbebbbeebebbbbebeebeeeeeeeebbbbbeeeeebeebeeebeeeebeebbeb:    
Contact         :                                                                    bb      b                       

queryA       531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
                :****************************************************************************************************:
8gy6_A_1     531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
SecStr          :HHH     EE EEEE   BSSSS EEEE   HHHHHHHHHHHHHHHHHHSS  S SB TT  SSSSHHHHHHHHHTSS SSB  EE   TTHHHH  SHH:    
ExpBur          :bbebbbbbbbbbebeeebeeeeeeebebbbbbbbebbbbbbbbebbeebeeeeebbbbbeeeebbbbbbebbeebbeebeeeebbbbebeebebbbbbbb:    
Contact         :            b                                                                                       

queryA       631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
                :****************************************************************************************************:
8gy6_A_1     631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
SecStr          :HHHHHHHTTGGGTTTS HHHHHHHHHHHHHHSSS EEEETTEEEE  S   TT HHHHHHHHHHHHHHHHHHHHHHHHTS TTT    TTHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbebbebbbbbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbeb:    

queryA       731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
                :****************************************************************************************************:
8gy6_A_1     731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
SecStr          :HTT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEBHHHHHHS S  SSHHHHHHHHHHS    GGG      TTS  S BTTBEEEEEETTS EEEEE:    
ExpBur          :bbeeeeeeeebbeebbebbeebbbbbbbeeebbbbbbbebeeeebbbbeebbbbbbbbbbbbbbeeeebbebeebeebbeebeebebbebeeeeeebbbb:    

queryA       831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTV: 930
                :*****************************************************************               ********************:
8gy6_A_1     831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXXXXXXNTSRYWEPEFYEAMYTPHTV: 930
SecStr          :E  HHHHHHHHT B S  SS THHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHH ---------------  S SSSHHHHHHTTSTT  :    
ExpBur          :bbebbebbbbbbbbeeebeeeeeebbeebbebbbbbbbbeebeeeeebebbebbbebbeeeeeee---------------eeeeebeeebbeebbbbeee:    

queryA       931:LQ: 932
                :**:
8gy6_A_1     931:LQ: 932
SecStr          :  :    
ExpBur          :ee:

Protein Model on 8gy6_A_1_F_1 (TEMPLATE: 8gy6 )

Input Residue Numbers for Focused Sites