[pdbjlvh2]Protein Model on 8gy6_A_1_B

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 8gy6_A_1_B_1

Protein Model on 8gy6_A_1_B_1 (TEMPLATE: 8gy6 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [859 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		B 1 (B)	polymer(polypeptide(L)) [113 aa]	Non-structural protein 8 :R1AB_SARS2	270L 271L 272K 273Y 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 366L 368F 371L 372L 375A 378P 379A 380M 381H 382A 383A 384S 385G 386N 387L 388L 389L 390D 391K 392R 403N 405V 407F 506F 508K 509W 514L 515Y 518S (identity: 100.0 %/95.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8gy6_A_1 identity=95.2%

queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA: 130
                :********************                  ****** ***************************         *******************:
8gy6_A_1      31:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXYFVVKRXTFSNYQHEETIYNLLKDCPAVAKHDFFXXXXXXXXXPHISRQRLTKYTMADLVYA: 130
SecStr          : B    EESSS EE S  B ------------------      -  HHHHHHHHHHHHS  STTB   B  ---------   B  S  SSBHHHHHHH:    
ExpBur          :eebbbbeeeeebbbbbebee------------------eeeebe-eeeeeebbeebeeebeebebbbebeee---------eebbbeebbebbbbbbbbb:    

queryA       131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
                :****************************************************************************************************:
8gy6_A_1     131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
SecStr          :HHS  SSS HHHHHHHHHTTSS GGGTTSTTTT SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTEEEE  STTBBSS  B    SSEE  TT  :    
ExpBur          :bbbbebeebebbeebbbeeebbeeebbeeeebbbbbebeebeebbeebbeebbebbbbbbebbebbeebbbebebbbbbbbbbbbbbebbebeeeeeeeb:    

queryA       231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
                :****************************************************************************************************:
8gy6_A_1     231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
SecStr          : EE HHHHHHTGGGTTTTTGGGGGGBTTSSSSS B    TT    HHHHHHHHHHHTTT  S   SSGGGS SSTTHHHHHHHHHHHTSSS GGG EEEE:    
ExpBur          :ebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebeeebeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbeeee:    
Contact         :                                       bbbb                                                 bbbb bbb

queryA       331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
                :****************************************************************************************************:
8gy6_A_1     331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
SecStr          :  EEETTEEE  EEEEE SSS EEE S   S   S  HHHHHHHHTSSHHHHTSSEE   SS SS B EESSSS         B  HHHHHHHHHTT S :    
ExpBur          :eebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeeebebbeebbbbeeeeeeeebebeebeeebbbbeeeeeeeeebeebeebeebeebbeeeebee:    
Contact         :bb     bbbb                        b b  bb  b  bbbbbbbbbbbbbbb          b b b                       

queryA       431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
                :****************************************************************************************************:
8gy6_A_1     431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
SecStr          :TT SS    B     SS HHHHHGGGGG       TTTHHHHHHHHHHHTTTS      STTS   S SS   HHHHTT  HHHHHHHS HHHHHHHHHH:    
ExpBur          :eeeebeeeeebeeeeeebbbebbeebebbbebbbbbbbbbbbbbbbebbbeebebbbbebeebeeeeeeeebbbbbeeeeebeebeeebeeeebeebbeb:    
Contact         :                                                                           b bb    bb  b            

queryA       531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
                :****************************************************************************************************:
8gy6_A_1     531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
SecStr          :HHH     EE EEEE   BSSSS EEEE   HHHHHHHHHHHHHHHHHHSS  S SB TT  SSSSHHHHHHHHHTSS SSB  EE   TTHHHH  SHH:    
ExpBur          :bbebbbbbbbbbebeeebeeeeeeebebbbbbbbebbbbbbbbebbeebeeeeebbbbbeeeebbbbbbebbeebbeebeeeebbbbebeebebbbbbbb:    

queryA       631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
                :****************************************************************************************************:
8gy6_A_1     631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
SecStr          :HHHHHHHTTGGGTTTS HHHHHHHHHHHHHHSSS EEEETTEEEE  S   TT HHHHHHHHHHHHHHHHHHHHHHHHTS TTT    TTHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbebbebbbbbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbeb:    

queryA       731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
                :****************************************************************************************************:
8gy6_A_1     731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
SecStr          :HTT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEBHHHHHHS S  SSHHHHHHHHHHS    GGG      TTS  S BTTBEEEEEETTS EEEEE:    
ExpBur          :bbeeeeeeeebbeebbebbeebbbbbbbeeebbbbbbbebeeeebbbbeebbbbbbbbbbbbbbeeeebbebeebeebbeebeebebbebeeeeeebbbb:    

queryA       831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTV: 930
                :*****************************************************************               ********************:
8gy6_A_1     831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXXXXXXNTSRYWEPEFYEAMYTPHTV: 930
SecStr          :E  HHHHHHHHT B S  SS THHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHH ---------------  S SSSHHHHHHTTSTT  :    
ExpBur          :bbebbebbbbbbbbeeebeeeeeebbeebbebbbbbbbbeebeeeeebebbebbbebbeeeeeee---------------eeeeebeeebbeebbbbeee:    

queryA       931:LQ: 932
                :**:
8gy6_A_1     931:LQ: 932
SecStr          :  :    
ExpBur          :ee:

Protein Model on 8gy6_A_1_B_1 (TEMPLATE: 8gy6 )

Input Residue Numbers for Focused Sites