#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 8gwm_A_1_B_1

Protein Model on 8gwm_A_1_B_1 (TEMPLATE: 8gwm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [928 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [187 aa] Non-structural protein 8 :R1AB_SARS2 271L 273Y 274D 324T 326F 328P 329L 330V 331R 332K 336D 338V 339P 340F 344T 368F 371L 379A 380M 381H 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 402T 403N 404N 407F 509W 514L 517D 518S 523D 666M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8gwm_A_1 identity=100.0%
queryA         4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
                :****************************************************************************************************:
8gwm_A_1       4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
SecStr          :  HHHHHHHGGG   EEESSSSS    EEEEEEEESSS EEEEEEEE S EEEEEE GGG EEEEEEEEEE  HHHHHHHHHHHHHHTT TTB EEEEEE:    
ExpBur          :eeebbeebbeebebebeeeeeeeeeeebebbbbeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbebeeeebeebeebbeebeebebbbebebbe:    

queryA       104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
                :****************************************************************************************************:
8gwm_A_1     104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
SecStr          :EESSSSEEEEEEEEEE SSBHHHHHHHHHS  TTS HHHHHHHHHTTSS GGGGGSSSTT SSS TTHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTEEE:    
ExpBur          :beeeeeebbbbbbbebbebbbbbbbbbbbebeeeebeebeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbeebbebbeebeeebbeb:    

queryA       204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
                :****************************************************************************************************:
8gwm_A_1     204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
SecStr          :E  GGGBBSS  B   SS EE STT  EEE HHHHHHHHHHHHHTTTTGGGGBTTS TTS B    TT    HHHHHHHHHHH TT  S   SSGGG SS:    
ExpBur          :ebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbebeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebee:    
Contact         :                                                                   b bb                             

queryA       304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
                :****************************************************************************************************:
8gwm_A_1     304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
SecStr          :HHHHHHHHHHHHHHTTSS GGG EEEEE  EETTEE  EEEEEEETTTEEEE S   SSBS   HHHHHHHHH HHHHHHTSEE    S SS EEEESSS:    
ExpBur          :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeeeeebbeebbbbeeeeeeeebebeebebebebbeee:    
Contact         :                    b b bbbbb   b bbb   b                       b  b       bbb bb bbbbbbb   b b   bb

queryA       404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
                :****************************************************************************************************:
8gwm_A_1     404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
SecStr          :S     B   EE HHHHHHHHTTT S TT S     B   B TTHHHHHHGGGGG       HHHHHHHHHHHHHTT S       GGG   S SSS   :    
ExpBur          :eeeeeebeeeeebeebeebbeeeebeeeeeebeeebebeeeeeebebebbbebebbeebbbbbbbbbbbbbbbbebbeebeebebebeeeeeeeeeeebb:    
Contact         :b  b                                                                                                

queryA       504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
                :****************************************************************************************************:
8gwm_A_1     504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
SecStr          :TTGGGT  HHHHHHHS HHHHHHHHHHTTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHTT SSSSB TT  STTTHHHHHHH:    
ExpBur          :bbbeeeeebeebbeebeeeebeebbeebbebbbbbbbbbebeeebeeeeebebebebbbbbbbbbebbbbebbeebeeeeeebbbbeeeeebbbbeebbe:    
Contact         :     b    b  bb    b                                                                                

queryA       604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
                :****************************************************************************************************:
8gwm_A_1     604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
SecStr          :HHHTT SSEEEEE   TTHHHH  HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHHTS EEEETTEEEE  SS  TTSTTHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbebeeebeeeeebbbbbbbbbbbbebbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbb:    
Contact         :                                                              b                                     

queryA       704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
                :****************************************************************************************************:
8gwm_A_1     704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
SecStr          :HHHHHTS TTS   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHHS    TTS EEES:    
ExpBur          :bbbbbebbbeebeeeebbebbbebbebbbeeeeeeeebbeebeebbeebbbbbbeeeebbbbbbbebbeeebbbebebbbbbbbbbbbbbbeeeebbeee:    

queryA       804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
                :****************************************************************************************************:
8gwm_A_1     804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
SecStr          : TTS  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESTTSSS GGGT HHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS:    
ExpBur          :eeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeebeebbeebeebbebbbebbbbeeeeeeebbebbebbbebbeebbeeeeeeeeeee:    

queryA       904:SVMLTNDNTSRYWEPEFYEAMYTPHTVL: 931
                :****************************:
8gwm_A_1     904:SVMLTNDNTSRYWEPEFYEAMYTPHTVL: 931
SecStr          :    SS   GGGGSTHHHHGGGSSS   :    
ExpBur          :eeeeeeeebeeebeeeebeebbeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123