#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [931 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 273Y 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 344T 365R 368F 371L 379A 380M 381H 383A 384S 386N 387L 388L 389L 391K 392R 398V 402T 403N 407F 447N 509W 514L 518S 523D 666M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwk_A_1 identity=100.0% |
queryA 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 :****************************************************************************************************: 8gwk_A_1 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 SecStr : SSHHHHHHHHTTS EEESSSSSS EEEEEEEESSS EEEEEEEE S EEEEEE GGG EEEEEEEE SHHHHHHHHHHHHHTT TTB EE: ExpBur :eeeeeebbeebbeeeeeebeeeeeeeeeeeeebbebeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebe: queryA 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 :****************************************************************************************************: 8gwk_A_1 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 SecStr :EEEEESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSSSTT SSS TTHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT: ExpBur :bbebeeeeeeebbbbbbebbebbbbbbbbbbbebeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbeebbeebbebbeebbebbeebeeeb: queryA 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 :****************************************************************************************************: 8gwk_A_1 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 SecStr :EEEE GGGBBTTS B TT EE TT EEE HHHHHHHTTHHHHTTGGGGGGBTTS TTS B TT HHHHHHHHHHH TT S SSGGG: ExpBur :bebebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbee: Contact : bb b queryA 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 :****************************************************************************************************: 8gwk_A_1 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 SecStr : SSHHHHHHHHHHHHHHTTSS TTS EEEEE EETTEE EEEEEEETTTEEEE S SSBS HHHHHHHHH SHHHHTTSEE S SS EEEE: ExpBur :beebebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeeeebbeebbbbeeeeeeeeeebeebebebebb: Contact : b b bbbbb bbb b b b b bbb bb bbbb bb b queryA 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 :****************************************************************************************************: 8gwk_A_1 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 SecStr :SSSS B B EE HHHHHHHHTTT S TT S B B TBHHHHHHGGGGG HHHHHHHHHHHHHTT S TTS S S S: ExpBur :eeeeeeeeebeeeeebeebeebbeeeebeeeebebeeebebeeeeeebebebbbebebbeebbbbbbbbbbbbbbbbebbeebeebebebeebeeeeeee: Contact : bb b b queryA 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 :****************************************************************************************************: 8gwk_A_1 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 SecStr : SSGGGT HHHHHHHS HHHHHHHHHHTTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHTT SSSB TT STTTHHHH: ExpBur :ebbbbbeeeeebeebbeebeeeebeebbeebbebbbbbbbebebeeebeeeeebebebbbbbbbbbbbebbbbebbebbeeeeeebbbbeeeeebbbbee: Contact : b b b b queryA 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 :****************************************************************************************************: 8gwk_A_1 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 SecStr :HHHHHHTT SSEEEEE TTHHHH HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHHTS EEEETTEEEE SS TTSTTHHHHHHHHHHHHHH: ExpBur :bbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbebeeebeeeeebbbbbbbbbbbbebbbbbebbbbebebbbbeebebbebbbbbbbbbbbb: Contact : b queryA 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 :****************************************************************************************************: 8gwk_A_1 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 SecStr :HHHHHHHHTS TTS HHHHHHHHHHHHHHTT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS HHHHHHHHHHHHS TTS E: ExpBur :bbbbbbbbebbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbbebbeeebbbebebbbbbbbbbbbbbbeeeebb: queryA 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 :****************************************************************************************************: 8gwk_A_1 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 SecStr :EES TTS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSGGGGSGGGT HHHHHHHHHTGGGGG SSHHHHHHHHHHHHHHHHHHHHHHTTTT: ExpBur :eeeeeeebbeebeebebbebebeeeebbbbbbebbebbbbbbebeeeeeeebbeebeebbebbbebbbbeeeeeeebbebbebbbebbeebbeeeeeeee: queryA 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHTVL: 931 :*******************************: 8gwk_A_1 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHTVL: 931 SecStr :TTS SGGGGGSSHHHHGGGSSS : ExpBur :eeeeeeeeeeeeeeebeeeebeebbeeeeee: |