[pdbjlvh2]Protein Model on 7uo9_A_1_E

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7uo9_A_1_E_1

Protein Model on 7uo9_A_1_E_1 (TEMPLATE: 7uo9 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [926 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		E 1 (T)	polymer(polyribonucleotide)	Template RNA (55-MER)	408Q 496N 500K 501S 507N 511K 541Q 543N 544L 546Y 557V 558A 559G 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 686T 687T 689Y 857E 860V 864I 914R 915Y 920F 924M (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7uo9_A_1 identity=100.0%

queryA         4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
                :****************************************************************************************************:
7uo9_A_1       4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
SecStr          : HHHHHHHH SS   EEESSSSSS    EEE  EE SS EES EEE   EE EEEEETTTEEEEEEEEEEE  SSHHHHHHHHHHHHTTSTTB  EEEEE:    
ExpBur          :eeebbeebbbeeebebeeeeeeeeebeeebbbbbeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbbbeeeebeebeebbeebeebebbbebbbbe:    

queryA       104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
                :****************************************************************************************************:
7uo9_A_1     104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
SecStr          :EE SSSEEEEEEEEEE SSBHHHHHHHHHS  TTS HHHHHHHHHTTSS GGGGGSTTTT TTT THHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTEEE:    
ExpBur          :beeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbeebeebbebbbebbbebbebbeebbebbbbbeebbbeb:    

queryA       204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
                :****************************************************************************************************:
7uo9_A_1     204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
SecStr          :E  GGGBBTTS B   SS EE STT   EE HHHHHHHHHHHHHTTGGGGGGBTTS TTS B    SS    HHHHHHHHHHH TT  S   SSTTS  S:    
ExpBur          :bbbbbbbbbebebbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeebeeeeeebbeebeebbeebbebbebebbbbbeebee:    

queryA       304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
                :****************************************************************************************************:
7uo9_A_1     304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
SecStr          :HHHHHHHHHHHHHHTTSS TTSSS  EEEEEETTEEEEEE  EEETTTEEE  SS   SB    HHHHHHHHHSHHHHHHHSEE   SS SS EEEESSS:    
ExpBur          :bbbbbbbbbbbbbbbebbbeebbbbbeeebebeeeebebbbbbbbebbbbbebeeeeeeeeebeebeebbbebbbbebbeeeeebebeebebebebbeee:    

queryA       404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
                :****************************************************************************************************:
7uo9_A_1     404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
SecStr          :S   B B   EE HHHHHHHHHTT S TT S     B   B TBHHHHHHHGGGG       HHHHHHHHHHHHHHTTT       TTS   S S SB  :    
ExpBur          :eeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbbbbeebebbbbebeebebeeeeeebb:    
Contact         :    b                                                                                       b   bb  

queryA       504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
                :****************************************************************************************************:
7uo9_A_1     504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
SecStr          :TTGGGT BHHHHHHSS HHHHHHHHHHHTTS    EEEE      BSSS     EE  HHHHHHHHHHHHHHHHHHTT SSSSB TT  STTTHHHHHHH:    
ExpBur          :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeebbebebbbbbbbbbbbbbbbbebbebbeeeeebbbbbebebeebbbbebbe:    
Contact         :   b   b                             b bb b          bbb         b       b  b         b b bb        

queryA       604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
                :****************************************************************************************************:
7uo9_A_1     604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
SecStr          :HHHTT SSEEEEEEE TTHHHH  HHHHHHHHHHHGGG TTT  HHHHHHHHHHHHHHHTS EEESSSSEE   SS  TTSTTHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeebeeeebbbbbbebbbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbbebbbebbbbbbbbbbbbbbbb:    
Contact         :                                                                              bbbbbb b              

queryA       704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
                :****************************************************************************************************:
7uo9_A_1     704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
SecStr          :HHHHHSS STT   HHHHHHHHHHHHHHHS SS  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHHS    TTT EEES:    
ExpBur          :bbbbbbbbbeebeeeebeebbbebbbbbbeeeeeeeebbeebbebbeebbbbbbebebbbbbbbbebbeeebbbbeebbbbbbbbbbbbbbeeeebbebe:    

queryA       804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
                :****************************************************************************************************:
7uo9_A_1     804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
SecStr          : GGG  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESSSGGG GGG SHHHHHHHHHHGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS:    
ExpBur          :eeeebbeebeeeebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbeebbebbbebbbbeebeeebbbebbebbbebbeebbeeeeeebeeee:    
Contact         :                                                     b  b   b                                       

queryA       904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :**************************:
7uo9_A_1     904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :      GGGTTTTSTHHHHTTSSTT :    
ExpBur          :eeeeeeeebeebbeeebbeebbeeee:    
Contact         :          bb    b   b

Protein Model on 7uo9_A_1_E_1 (TEMPLATE: 7uo9 )

Input Residue Numbers for Focused Sites