#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7uo4_A_1_G_1

Protein Model on 7uo4_A_1_G_1 (TEMPLATE: 7uo4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [927 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b G 1 (A) non-polymer(NWX) [[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-cyano-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate 545K 551K 555R 557V 618D 619Y 620P 621K 622C 623D 682S 687T 688A 691N 759S 760D 798K (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7uo4_A_1 identity=100.0%
queryA         3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102
                :****************************************************************************************************:
7uo4_A_1       3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102
SecStr          : HHHHHHHHS TT  EEEE SSSS  EEEEEEEEEESSS EEEEEEEEEEEEEEEEEETTTEEEEEEEEEEE  HHHHHHHHHHHHTTTT SSB  EEEE:    
ExpBur          :eeeebbeebbeeeebebeeebeeeeebeeebbbbeeeeebbbbbbbebeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebb:    

queryA       103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202
                :****************************************************************************************************:
7uo4_A_1     103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202
SecStr          :EEESSSSEEEEEEEEEE SSBHHHHHHHHHS  SS  HHHHHHHHHTTSS TTGGGSTTTT TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTEE:    
ExpBur          :ebeeeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeebbbbbbebeebbebbbebbeebbebbeebbebbebbeebbbe:    

queryA       203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302
                :****************************************************************************************************:
7uo4_A_1     203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302
SecStr          : B  GGGBBTTS B   SS EE STT    B TTTTTTTSTHHHHTTTTGGGSBGGG SSS B    TT    HHHHHHHHHHHSTT  S   SSGGG  :    
ExpBur          :bbbbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeeeeeeeeebbebbeebbeebbebbeeebebbbeebe:    

queryA       303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402
                :****************************************************************************************************:
7uo4_A_1     303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402
SecStr          :SHHHHHHHHHHHHHHTSSS TTS B  EE  EETTEE  EE  EE SSS EE  S   SSB    HHHHHHHHHSHHHHHHSSB    TT SS EEEBSS:    
ExpBur          :ebbbbbbbbbbbbbbbebbbeebbbebeeebebeeeebebbbbbbbebbbbbebeeeeeebeebeebbebbbebbbbeebeeeeebebeebebebebbee:    

queryA       403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502
                :****************************************************************************************************:
7uo4_A_1     403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502
SecStr          :SS   B B   EE HHHHHHHHHTT S TT SS    B   B TBHHHHHHHGGGG       HHHHHHHHHHHHHTTSS       GGG   S S S  :    
ExpBur          :eeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebeebebebeebebeeeeeeb:    

queryA       503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602
                :****************************************************************************************************:
7uo4_A_1     503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602
SecStr          : TTGGGT  HHHHHHSS HHHHHHHHHHHTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHHT SSSSB  S  STTTHHHHHH:    
ExpBur          :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeebbebebebbbbbbbbbebbbbebbebbeeeeebbbbbebebeebbbeebb:    
Contact         :                                          b     b   b b                                             

queryA       603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702
                :****************************************************************************************************:
7uo4_A_1     603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702
SecStr          :HHHSSS SSEEEEEEE TTTTTS  HHHHHHHHHHHTSS SSSS HHHHHHHHHHHHHHTTS EEETTSSEEE  SS  TTSSSSTTHHHHHHHHHHHHH:    
ExpBur          :eebbeebeeeebbbbebbbbbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbb:    
Contact         :               bbbbbb                                                          b    bb  b           

queryA       703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802
                :****************************************************************************************************:
7uo4_A_1     703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802
SecStr          :HHHHHHTS STT   HHHHHHHHHHHHHHHS SS  HHHHHHHHHHHHHH  EEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHTS    GGGEEE :    
ExpBur          :bbbbbbbbebeebeeeebeebbeebbebbbeeeeeeeebbeebbebbeebbbbbbebebbbbbbbeebbeebbbbbbebbbbbbbbbbbbbbeeeebbee:    
Contact         :                                                        bb                                     b    

queryA       803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902
                :****************************************************************************************************:
7uo4_A_1     803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902
SecStr          :  GGG  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESSSGGGG TT HHHHHHHHHHHGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbebbbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeeeee:    

queryA       903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :***************************:
7uo4_A_1     903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :S      SSSSSTTSHHHHHGGGSTT :    
ExpBur          :eeeeeeeeeeeeebeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123