#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7uo4_A_1_B_1

Protein Model on 7uo4_A_1_B_1 (TEMPLATE: 7uo4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [927 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [187 aa] Non-structural protein 8 :R1AB_SARS2 269D 270L 271L 272K 273Y 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 344T 365R 368F 371L 378P 379A 380M 381H 382A 383A 384S 385G 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 403N 404N 405V 407F 509W 514L 515Y 517D 518S 523D 666M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7uo4_A_1 identity=100.0%
queryA         3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102
                :****************************************************************************************************:
7uo4_A_1       3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102
SecStr          : HHHHHHHHS TT  EEEE SSSS  EEEEEEEEEESSS EEEEEEEEEEEEEEEEEETTTEEEEEEEEEEE  HHHHHHHHHHHHTTTT SSB  EEEE:    
ExpBur          :eeeebbeebbeeeebebeeebeeeeebeeebbbbeeeeebbbbbbbebeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebb:    

queryA       103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202
                :****************************************************************************************************:
7uo4_A_1     103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202
SecStr          :EEESSSSEEEEEEEEEE SSBHHHHHHHHHS  SS  HHHHHHHHHTTSS TTGGGSTTTT TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTEE:    
ExpBur          :ebeeeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeebbbbbbebeebbebbbebbeebbebbeebbebbebbeebbbe:    

queryA       203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302
                :****************************************************************************************************:
7uo4_A_1     203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302
SecStr          : B  GGGBBTTS B   SS EE STT    B TTTTTTTSTHHHHTTTTGGGSBGGG SSS B    TT    HHHHHHHHHHHSTT  S   SSGGG  :    
ExpBur          :bbbbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeeeeeeeeebbebbeebbeebbebbeeebebbbeebe:    
Contact         :                                                                  bbbbb                             

queryA       303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402
                :****************************************************************************************************:
7uo4_A_1     303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402
SecStr          :SHHHHHHHHHHHHHHTSSS TTS B  EE  EETTEE  EE  EE SSS EE  S   SSB    HHHHHHHHHSHHHHHHSSB    TT SS EEEBSS:    
ExpBur          :ebbbbbbbbbbbbbbbebbbeebbbebeeebebeeeebebbbbbbbebbbbbebeeeeeebeebeebbebbbebbbbeebeeeeebebeebebebebbee:    
Contact         :                    bbbb bbbbb     bbb   b                    b  b  b      bbbbbbbbbbbbbbb   b b b  

queryA       403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502
                :****************************************************************************************************:
7uo4_A_1     403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502
SecStr          :SS   B B   EE HHHHHHHHHTT S TT SS    B   B TBHHHHHHHGGGG       HHHHHHHHHHHHHTTSS       GGG   S S S  :    
ExpBur          :eeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebeebebebeebebeeeeeeb:    
Contact         :bbb b                                                                                               

queryA       503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602
                :****************************************************************************************************:
7uo4_A_1     503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602
SecStr          : TTGGGT  HHHHHHSS HHHHHHHHHHHTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHHT SSSSB  S  STTTHHHHHH:    
ExpBur          :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeebbebebebbbbbbbbbebbbbebbebbeeeeebbbbbebebeebbbeebb:    
Contact         :      b    bb bb    b                                                                               

queryA       603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702
                :****************************************************************************************************:
7uo4_A_1     603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702
SecStr          :HHHSSS SSEEEEEEE TTTTTS  HHHHHHHHHHHTSS SSSS HHHHHHHHHHHHHHTTS EEETTSSEEE  SS  TTSSSSTTHHHHHHHHHHHHH:    
ExpBur          :eebbeebeeeebbbbebbbbbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbb:    
Contact         :                                                               b                                    

queryA       703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802
                :****************************************************************************************************:
7uo4_A_1     703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802
SecStr          :HHHHHHTS STT   HHHHHHHHHHHHHHHS SS  HHHHHHHHHHHHHH  EEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHTS    GGGEEE :    
ExpBur          :bbbbbbbbebeebeeeebeebbeebbebbbeeeeeeeebbeebbebbeebbbbbbebebbbbbbbeebbeebbbbbbebbbbbbbbbbbbbbeeeebbee:    

queryA       803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902
                :****************************************************************************************************:
7uo4_A_1     803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902
SecStr          :  GGG  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESSSGGGG TT HHHHHHHHHHHGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbebbbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeeeee:    

queryA       903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :***************************:
7uo4_A_1     903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :S      SSSSSTTSHHHHHGGGSTT :    
ExpBur          :eeeeeeeeeeeeebeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123