[pdbjlvh2]Protein Model on 7thm_A_1_B

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7thm_A_1_B_1

Protein Model on 7thm_A_1_B_1 (TEMPLATE: 7thm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [860 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		B 1 (B)	polymer(polypeptide(L)) [108 aa]	Non-structural protein 8 :R1AB_SARS2	270L 271L 273Y 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 372L 375A 378P 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 391K 392R 398V 400A 402T 403N 405V 407F 509W (identity: 100.0 %/93.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7thm_A_1 identity=93.2%

queryA         6:SFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFR: 105
                :*********************************************   *******   ****************************************  :
7thm_A_1       6:SFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKXXXCRFQEKDXXXNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKXX: 105
SecStr          : HHHHHSSSS   EEE SBTTB    EEEEEEESSS EEEEEEE ---  EEEE --- EEEEE  EEE  HHHHHHHHHHHHHHTTSTTS   EEE --:    
ExpBur          :ebeeebbeebeeebeeeeeeeeeeeeebbbbeeeeebbbbbbbee---bbbbbee---eeebbbbbbbeeeeeebeebeebbeebeebebbbebebbe--:    

queryA       106:IDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVL: 205
                :     ***********************************************************************************************:
7thm_A_1     106:XXXXXVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVL: 205
SecStr          :-----  EEE  SB SSBHHHHHHHHHS  TTS HHHHHHHHHTTSS GGGGGSSS S SSS THHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT BEE :    
ExpBur          :-----ebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebebbbebeebbebbeebbeebbebbbebbebbbbbeebbbebbb:    

queryA       206:TLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDR: 305
                :*******************  ********************************   ********************************************:
7thm_A_1     206:TLDNQDLNGNWYDFGDFIQXXPGSGVPVVDSYYSLLMPILTLTRALTAESHVDXXXTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDR: 305
SecStr          : GGGSBSSS     TT B --     EE HHHHHHHTHHHHHTTTTSGGGB  ---   B    TT    HHHHHHHHHHH TT  S   SSGGG SSHH:    
ExpBur          :bbbbbbbebbbbebbebee--eeebebebbbbbbbbbbbbbbbebbebbbeee---eeeeeebeeeeeebbeebeebbeebbebbeeebbbbbeebeebb:    
Contact         :                                                                bb b                                

queryA       306:CILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNV: 405
                :**********************************************************    **************************************:
7thm_A_1     306:CILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSXXXXFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNV: 405
SecStr          :HHHHHHHHHHHHTTSS TTTSB  EE  EETTEE  EE EEE SSS EEE SS  S  ---- HHHHHHHH HHHHHHTSB    SS  S EEEESSSS :    
ExpBur          :bbbbbbbbbbbbbebbeeebbbbbeeebeeeeeeeebbbbbbbebbbbbebeeeeeee----eeeebbeebbbbebeeeeeebebeebebebebbeeeee:    
Contact         :                 bbbb bbbbb     bbbb  b                       b  bb  b  bbbbbbb bbbb bb     b b bb b

queryA       406:AFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFP: 505
                :****************************************************************************************************:
7thm_A_1     406:AFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFP: 505
SecStr          :  B B    B HHHHHHHHHTT S TT S     B   B SBTHHHHHGGGGG       HHHHHHHHHHHHHHGGG       TTT       S   HH:    
ExpBur          :eeeebeeeeeeeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebeebbbeeeebeeeeeeeebbbb:    
Contact         : b                                                                                                  

queryA       506:FNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTV: 605
                :**************    **********************************************************************************:
7thm_A_1     506:FNKWGKARLYYDSMXXXXQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTV: 605
SecStr          :HHTT  HHHHHTT ---- HHHHHHHTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHHT  SSSB TT  STTTHHHHHHHHH:    
ExpBur          :beeeeebeebbeee----eeebbebbbebbbbbbbebebeeeebeeeebebebbbbbbbbbbbbbbbbebbebbeeeeebbbbbebebeebbbbebbeeb:    
Contact         :   b                                                                                                

queryA       606:YSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVN: 705
                :****************************************************************************************************:
7thm_A_1     606:YSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVN: 705
SecStr          :TS  SS   B    TTHHHHS HHHHHHHHHHHTTT TTTS HHHHHHHHHHHHHHHTS EEE SSEEEE  S   TTSTTHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbebbebebbbbbbbbbbbbbbbbbb:    

queryA       706:ALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDL: 805
                :*********  *****************************************************************************************:
7thm_A_1     706:ALLSTDGNKXXDKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDL: 805
SecStr          :HHHHS TT --  HHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEE HHHHHHTSS  HHHHHHHHHHHHS    GGG      T:    
ExpBur          :bbbbebbee--eeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebbeeeeb:    

queryA       806:TKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSV: 905
                :*****************   **********************       *************************************              :
7thm_A_1     806:TKGPHEFCSQHTMLVKQXXXYVYLPYPDPSRILGAGCFVDDIXXXXXXXMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLXXXXXXXXXXXXXX: 905
SecStr          :TS  S SSS EEEEE  --- EEEEE  HHHHHHHHHB    ------- THHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHH --------------:    
ExpBur          :eebbeebeebbbbebee---ebbbbbbebbebbbbbbbeeee-------eeeebeebbbbbbbbeebeeeebbebbebbbebbeee--------------:    

queryA       906:MLTNDNTSRYWEPEFYEAMYTPH: 928
                :           ************:
7thm_A_1     906:XXXXXXXXXXXEPEFYEAMYTPH: 928
SecStr          :----------- HHHHHHTTS  :    
ExpBur          :-----------eeeebeebbeee:

Protein Model on 7thm_A_1_B_1 (TEMPLATE: 7thm )

Input Residue Numbers for Focused Sites