#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7re3_A_1_I_1

Protein Model on 7re3_A_1_I_1 (TEMPLATE: 7re3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [927 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b I 1 (T) polymer(polyribonucleotide) Template RNA 408Q 500K 501S 507N 511K 541Q 543N 545K 557V 558A 559G 560V 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 687T 689Y 857E 860V 864I 914R 915Y 920F 924M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7re3_A_1 identity=100.0%
queryA         3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102
                :****************************************************************************************************:
7re3_A_1       3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102
SecStr          : HHHHHHHHHTTS   EEESSSSS    B    EEESSS EEE    B S  EEEEE TTS EEEEEEE  B  HHHHHHHHHHHHHTSS SSB  EEEE:    
ExpBur          :eeeebbeebbeebebebeeeeeeeeeeebebbebeeeeebbbbbbbebeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebb:    

queryA       103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202
                :****************************************************************************************************:
7re3_A_1     103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202
SecStr          :EEESSSSEEEEEEEEEE SSBHHHHHHHHHS  SSS  TTHHHHHHTTSS SSGGGSS SS SSS THHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTEE:    
ExpBur          :ebeeeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeebbbbbbebeebbebbeebbeebbebbeebbebbebbeebbbe:    

queryA       203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302
                :****************************************************************************************************:
7re3_A_1     203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302
SecStr          :EE  GGGBBSSS B   TT EE STT   EE HHHHHHHTTHHHHTTTTGGGGBGGG TTS B    TT    HHHHHHHHHHHSSS  S   SSGGG S:    
ExpBur          :bbbbbbbbbbebbbbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebe:    

queryA       303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402
                :****************************************************************************************************:
7re3_A_1     303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402
SecStr          :SHHHHHHHHHHHHHHTTSS GGG EEEEE  EETTEE  EEEEEE SSS EEE S   SEE    HHHHHHHHHSHHHHHHHSEE    S SS EEEESS:    
ExpBur          :ebbbbbbbbbbbbbbbebbeeebbeebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebbebbbebbbbebeeeeeebebeebebebebbee:    

queryA       403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502
                :****************************************************************************************************:
7re3_A_1     403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502
SecStr          :SS   B B   EE HHHHHHHHTTT S TT S     B   B TBHHHHHHGGGGG       HHHHHHHHHHHHHHT S       TTT   S SSS  :    
ExpBur          :eeeeeeebeeeeebeebeebbeeeebbeeeeebebebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbebbeebebbebebeebeeeebeeeb:    
Contact         :     b                                                                                           bb 

queryA       503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602
                :****************************************************************************************************:
7re3_A_1     503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602
SecStr          : TTGGGT  HHHHHHHS HHHHHHHHHHHTSS     EEEEE    BSSSS  EEEEE HHHHHHHHHHHHHHHHHHTT SSSSB  S  STTTHHHHHH:    
ExpBur          :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbebb:    
Contact         :    b   b                             b b b           bbbb        b       b  b         b b bb       

queryA       603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702
                :****************************************************************************************************:
7re3_A_1     603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702
SecStr          :HHHSSS SSB EEE   TTTTTS  HHHHHHHHHHTTTT SSSS HHHHHHHHHHHHHHTTSSEEESSS EEE  SS  TTSSSSHHHHHHHHHHHHHHH:    
ExpBur          :eebeeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbeebbbebebbbbeebebeebbbbbbbbbbbbbb:    
Contact         :                                                                               bbbb b b             

queryA       703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802
                :****************************************************************************************************:
7re3_A_1     703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802
SecStr          :HHHHHHHS STT  SHHHHHHHHHHHHHHHS SS  HHHHHHHHHHHHHHS   EETTEE B  BHHHHHHTSS  HHHHHHHHHHHHSS   GGG EEE:    
ExpBur          :bbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbeebbeebbbbebebbbbbbbbbbbbbbeeeebbee:    

queryA       803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902
                :****************************************************************************************************:
7re3_A_1     803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902
SecStr          :  TTS  S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSSTTTSSTT SHHHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS:    
ExpBur          :eebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeebbeebeebbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeeeee:    
Contact         :                                                      b  b   b                                      

queryA       903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :***************************:
7re3_A_1     903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :SS   TT  GGGTTSTHHHHGGG TT :    
ExpBur          :eeeeeeeeebeeebeeeebeebbeeee:    
Contact         :           bb    b   b                                                                              


Input Residue Numbers for Focused Sites

ex) 2,15,123