#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [814 aa] | Replicase polyprotein 1ab :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [115 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 273Y 323P 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 372L 378P 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 405V 407F 447N 509W 514L 518S 523D (identity: 100.0 %/97.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ozu_A_1 identity=97.8% |
queryA 31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------: 117 :******************** : 7ozu_A_1 31:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX: 63 SecStr : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------: ExpBur :eebbebeeeeebbbbbebee--------------------------------------------------------------------------------: queryA 118:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163 : **********************************************: 7ozu_A_1 64:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163 SecStr :------------------------------------------------------ S BHHHHHHHHHS BTTB HHHHHHHHHTTSS HHHHHSTTSS: ExpBur :------------------------------------------------------eebebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebb: queryA 164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263 :****************************************************************************************************: 7ozu_A_1 164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263 SecStr : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B GGGBBTTS B S EE STTT B HHHHHHHHHHHHHTTGGGGGGBGGG SSS: ExpBur :bbbebeebbebbeebbeebbebbeebbebbeebeeebbebbbbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbebeeeeeee: queryA 264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 363 :************************************************************************************************** : 7ozu_A_1 264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 363 SecStr : B TT HHHHHHHHHHTSTT S SSGGG SSHHHHHHHHHHHHHHTSSS TTSSEEEEEEEEETTEEEEEEEEEEETTTEEEE S --: ExpBur :eeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebeeeeeeeebbbbbbbebbbbbebeeeee--: Contact : bb b bb b bbbbb bbbb b queryA 364:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463 : *************************************************************************************************: 7ozu_A_1 364:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463 SecStr :--- HHHHHHHHH HHHHHHHSB TT SS EEEESSSS B HHHHHHHHHTT S TT S B B TTHHHHHHGGGGG : ExpBur :---eebeebbeebbbbebeeeeeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbeeebebebebebeeeebebbbebbbebebbeebb: Contact : b bb bbbbbbb bbbbbbb b b b bb b b b queryA 464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563 :****************************************************************************************************: 7ozu_A_1 464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563 SecStr : HHHHHHHHHHHHHTTSSS GGG S SSS BTGGGT HHHHHHHS HHHHHHHHHHHTTS EEEEEE BSS EEEE HH: ExpBur :bbbbbbbbbbbbbbbbbeebebbebebeebeeeebeeebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebebbbb: Contact : b b b b queryA 564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663 :****************************************************************************************************: 7ozu_A_1 564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663 SecStr :HHHHHHHHHHHHHHHHHT SSSB TT STTTHHHHHHHHHTTT SSEEEEEE TTHHHH HHHHHHHHHHHTTT TTTS HHHHHHHHHHHHHHTT: ExpBur :bbbbbebbbbebbebbeeeeebbbbbeeeeeebbbbebbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbb: queryA 664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763 :****************************************************************************************************: 7ozu_A_1 664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763 SecStr :T EEEETTEEEE S TT TTHHHHHHHHHHHHHHHHHHHHHHHS STT HHHHHHHHHHHHHHSS S HHHHHHHHHHHHHHEEEEEETTEEE: ExpBur :bbbbbbeebbbebebbbbeebebbebbbbbbbbbbbbbbbbbbbbbbebeebeeeebeebbeebbebbbeeeeeeeebbebbbebbeebbbbbbebeebb: queryA 764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863 :****************************************************************************************************: 7ozu_A_1 764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863 SecStr :EEEEHHHHHHTSS HHHHHHHHHHTT GGG EEES TTT S BTTBEEEEEEETTEEEEEEE HHHHHHHHH SSGGGGSSHHHHHHHHHHH: ExpBur :bbbbeebbeebbbbbbebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeeeeeeebbeebbebb: queryA 864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :********************************* ********************: 7ozu_A_1 864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 929 SecStr :HHTSGGGGSSSHHHHHHHHHHHHHHHHHHHHH ------------- GGGGTSHHHHHGGGSTT : ExpBur :bebbbbeebeeeeebebbebbbebbeebbeeee-------------eeeeeeeeeebbeebbeeee: |