#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7oyg_A_1_B_1

Protein Model on 7oyg_A_1_B_1 (TEMPLATE: 7oyg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [814 aa] SARS-CoV-2 RNA-dependent RNA polymerase (nsp12) :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [81 aa] SARS-CoV-2 nsp8 :R1AB_SARS2 270L 271L 273Y 324T 325S 326F 328P 329L 330V 331R 378P 379A 382A 386N 387L 388L 389L 390D 391K 392R 396F 398V 402T 403N 405V 407F 447N 675V (identity: 100.0 %/97.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7oyg_A_1 identity=97.8%
queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------: 117
                :********************                                                                                :
7oyg_A_1      34:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX:  66
SecStr          : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------:    
ExpBur          :eeebebeeeeebbbbbebee--------------------------------------------------------------------------------:    

queryA       118:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163
                :                                                      **********************************************:
7oyg_A_1      67:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 166
SecStr          :------------------------------------------------------   SSBHHHHHHHHHS BTTB HHHHHHHHHTTSS HHHHHSTT S:    
ExpBur          :------------------------------------------------------eebebbbbbbbbbbbbbebeebeebeebbeebebbeeebbeeeebb:    

queryA       164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263
                :****************************************************************************************************:
7oyg_A_1     167:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 266
SecStr          : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B  GGGBBTTS B   SS EE STT    B HHHHHHHHHHHHHHTGGGGGGBGGG SSS:    
ExpBur          :bbbebeebbebbeebbeebbebbbebbebbeebeeebbebbbbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeee:    

queryA       264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 363
                :**************************************************************************************************  :
7oyg_A_1     267:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 366
SecStr          : B    TT    HHHHHHHHHHHSTT  S   SSGGG SSHHHHHHHHHHHHHHHTTS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEEE TT   --:    
ExpBur          :eeeeeeeeeeebeebbeebbeebbebbeeebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebeeeeeeeebbbbbbbebbbbbebeeeee--:    
Contact         :      bb b                                                  bbb bbbb                                

queryA       364:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463
                :   *************************************************************************************************:
7oyg_A_1     367:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 466
SecStr          :--- HHHHHHHHH HHHHHHHSEE   TT SSEEEEESSSS     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHHGGGG     :    
ExpBur          :---eeeeebbeebbbbebeeebeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbeebb:    
Contact         :              bb  b   bbbbbbb   b b   bb b b                                       b                

queryA       464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563
                :****************************************************************************************************:
7oyg_A_1     467:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 566
SecStr          :  HHHHHHHHHHHHHTTSS       GGG   S SSSB  TTGGGT BHHHHHHHS HHHHHHHHHHHTTS    EEEEEE    BSSS   EEEE  HH:    
ExpBur          :bbbbbbbbbbbbbbebbeebebbebebeebebeeeeeebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbeeeeebbeeeebebebebbbb:    

queryA       564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663
                :****************************************************************************************************:
7oyg_A_1     567:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 666
SecStr          :HHHHHHHHHHHHHHHHHT  SSSB TT  STTTHHHHHHHHHHTT SSEEEEEE  TTHHHH  HHHHHHHHHHHHGGGTTTS HHHHHHHHHHHHHHTT:    
ExpBur          :bbbbbebbbbebbebbeeeeebbbbbeeeebebbbeebbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbb:    

queryA       664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763
                :****************************************************************************************************:
7oyg_A_1     667:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 766
SecStr          :S EEEETTEEEE  S   TTSTTHHHHHHHHHHHHHHHHHHHHHHHS SSS   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEE:    
ExpBur          :bbbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbbbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebebbb:    
Contact         :           b                                                                                        

queryA       764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863
                :****************************************************************************************************:
7oyg_A_1     767:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 866
SecStr          :EEEEHHHHHTTSS  HHHHHHHHHHTT     GGG EEES TTT  S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSGGGSSSTHHHHHHHHHH:    
ExpBur          :bbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebbebeeeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeeeeebbeebbebb:    

queryA       864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :*********************************             ********************:
7oyg_A_1     867:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 932
SecStr          :HHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHH ------------- TTHHHHSTHHHHHHTSTT :    
ExpBur          :bebbbbeebeeeebbebbebbbebbeebeeeee-------------eebeeebeeebbeebbeeee:

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