#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7egq_A_1_B_1

Protein Model on 7egq_A_1_B_1 (TEMPLATE: 7egq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [926 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [187 aa] Non-structural protein 8 :R1AB_SARS2 270L 271L 273Y 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 344T 368F 371L 372L 380M 381H 384S 386N 387L 388L 389L 390D 391K 392R 398V 400A 402T 403N 404N 405V 509W 514L 518S 523D 666M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7egq_A_1 identity=100.0%
queryA         4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
                :****************************************************************************************************:
7egq_A_1       4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
SecStr          : TTHHHHHHTTS S   BSSSSSS   EEEEEEEESSS EEEEEEEE   EEEEEE GGG EEEEEEEEE   HHHHHHHHHHHHHH  STTB  EEEEE:    
ExpBur          :eeebeeebbeeeeeebeeebeeeeeeebebbbbeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebbe:    

queryA       104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
                :****************************************************************************************************:
7egq_A_1     104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
SecStr          :E SSS  EEEEEE S  SSBHHHHHHHHHS  TTS HHHHHHHHHTTSS GGGGGSSS S SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTEEE:    
ExpBur          :eeeeeeebbbbbbbebbebbbbbbbbbbbebeeeebebbeebbeebebbeeebbeeeebbbbeebeebeebbeebbeebbebbeebbebbeebeeebbeb:    

queryA       204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
                :****************************************************************************************************:
7egq_A_1     204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
SecStr          :E  GGGBBTTS B   TT EE STT   EE SHHHHHHHHHHHHTTGGGGTTBTTS TTS B    TT    HHHHHHHHHHHHTT  S   SSGGG  S:    
ExpBur          :ebbbbbbbbebebbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbeeebbbebeebee:    
Contact         :                                                                  bb b                              

queryA       304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
                :****************************************************************************************************:
7egq_A_1     304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
SecStr          :HHHHHHHHHHHHHHTTSS GGG S EEE  EETTEE  EEEEEE SSS EEE S   SSBS   HHHHHHHHT HHHHHHTSB     S  S EEEESSS:    
ExpBur          :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebeebbeebbbbeeeeeeeeeebeebebebebbeee:    
Contact         :                    b b bbbbb     bbb   b                       b  bb       bb  b bbbbbbb     b b bb

queryA       404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
                :****************************************************************************************************:
7egq_A_1     404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
SecStr          :S   B B   EE HHHHHHHHHTT S TT SS    B   B SBTHHHHHGGGGG       HHHHHHHHHHHHHTT S       GGG   S S S   :    
ExpBur          :eeeeeebeeeeebeebeebbeeeebeeeeeebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebeebebebeebeeeeeeeebb:    
Contact         :bb                                                                                                  

queryA       504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
                :****************************************************************************************************:
7egq_A_1     504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
SecStr          :TTGGGS  HHHHHHSS HHHHHHHHHHHTSS     EEEEE    BSS    EEEEE HHHHHHHHHHHHHHHHHHTT SSSSB TT  STTTHHHHHHH:    
ExpBur          :bbbeeeeebeebbeebeeeebeebbeebbebbbbbbbbbebeeebbeeeebebebebbbbbbbbbebbbbebbebbeeeeeebbbbeeeeeebbbeebbe:    
Contact         :     b    b   b    b                                                                                

queryA       604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
                :****************************************************************************************************:
7egq_A_1     604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
SecStr          :HHHTT SSEEEE    TTHHHH  HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHHTS EE  TTEEEE  SS  TTSS HHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbebeeebeeeeebbbbbbbbbbbbbbbbbbeebbbebebbbbeebebeebbbbbbbbbbbbbbb:    
Contact         :                                                              b                                     

queryA       704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
                :****************************************************************************************************:
7egq_A_1     704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
SecStr          :HHHHHTS STT   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEESHHHHHTSS  HHHHHHHHHHHHS    GGG  EE :    
ExpBur          :bbbbbeeebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbeeebeebbbbebebbbbbbbbbbbbbbeeeebbebe:    

queryA       804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
                :****************************************************************************************************:
7egq_A_1     804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
SecStr          :STTS  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESSTTSS TTT HHHHHHHHHHHGGGGG SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS:    
ExpBur          :ebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeebbeebeebbebbbebbbbeeeeeeebbebbebbbebbeebbeeeeeeeeeee:    

queryA       904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :**************************:
7egq_A_1     904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :    S    GGGGSTTTTGGGGSS  :    
ExpBur          :eeeeeeeeeeebbeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123