Protein Model on 7ed5_A_1_F_1
(TEMPLATE: 
7ed5
)Protein Model on 7ed5_A_1_F_1
(TEMPLATE: 7ed5
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
| 2 | b | F 1 (J) | polymer(polyribonucleotide) | RNA (5'-R(P*CP*CP*CP*CP*AP*UP*AP*AP*CP*UP*UP*AP*AP*UP*CP*UP*CP*AP*CP*AP*UP*AP*GP*C)-3') | 408Q 496N 500K 501S 507N 543N 557V 558A 559G 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 689Y 857E 864I 911N 914R 915Y 920F 924M (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7ed5_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
:****************************************************************************************************:
7ed5_A_1 28:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 127
SecStr : HHHHHHHS SS EEEESSSTTS EEEEEEEE SS EEEEEEEE B EEEE TTS EEEEEEEEEE HHHHHHHHHHHHHTTT TTB EEEEEE:
ExpBur :eeebbeebbeeeebebeeeeeeeeebebebbbbeeeeebbbbbbbeeeebbbbbbbeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebebbe:
queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
:****************************************************************************************************:
7ed5_A_1 128:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 227
SecStr :EESSSSEEEEEEEEEE SSBHHHHHHHHHS SSS HHHHHHHHTTTS S GGGSTTSS SSSSGGGSTTTGGGHHHHHHHHHHHHHHHHHHHHHTEE :
ExpBur :beeeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebeebbbebbeebbebbbebbebbebbeeebbeb:
queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
:****************************************************************************************************:
7ed5_A_1 228:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 327
SecStr :B GGGBBTTS B TT EE STT B HHHHHHHHHHHHHTTGGGGGGBTTS TTS B SS HHHHHHHHHHHSTT S SSGGG SS:
ExpBur :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeeeeeeeeebbebbeebbeebbebbebebbbbbeebee:
queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
:****************************************************************************************************:
7ed5_A_1 328:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 427
SecStr :SHHHHHHHHHHHHHTTTS GGGSEEEEE EETTEE EEEEEE SSS EE S SEES HHHHHHHHHSHHHHHHTSEE TT SS EEEESSS:
ExpBur :bebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeeeebbbebbbbebbeeeeebebeebebebebbeee:
queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
:****************************************************************************************************:
7ed5_A_1 428:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 527
SecStr :S B EE HHHHHHHHHTT S TT S B B STTHHHHHTTGGG HHHHHHHHHHHHHHT S GGG SSS S :
ExpBur :eeeeeebeeebebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbebbeebeebbbebeebeeeeeeeebb:
Contact : b b bb
queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
:****************************************************************************************************:
7ed5_A_1 528:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 627
SecStr :TTGGGT HHHHHHHS HHHHHHHHHHHTTS EEEEEE BSSS EEEE HHHHHHHHHHHSSSSSSSTT SSS TT STTTHHHHHHH:
ExpBur :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbebbe:
Contact : b b bbb b b b b b bb
queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
:****************************************************************************************************:
7ed5_A_1 628:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 727
SecStr :HHHTT SSEEEEEE TTTTTS HHHHHHHHHHHTSTTTTTS HHHHHHHHHHHHHHHTS EEEETTEEE S TTSS HHHHHHHHHHTTTHHHH:
ExpBur :ebbeebeeeebbbbebbebbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbebbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbb:
Contact : bbbb b
queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
:****************************************************************************************************:
7ed5_A_1 728:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 827
SecStr :HHHHTTS GGG HHHHHHHHHHHHHHHT S HHHHHTTHHHHHHHEEE BTTBEEEEEEHHHHHTTSS HHHHHHHHHHHSS GGG EEES:
ExpBur :bbbbbbbbbeebeeeebbebbbebbebbbeeeeebeebbeebbebbeebbbbbbeeebbbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebbebe:
queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
:****************************************************************************************************:
7ed5_A_1 828:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 927
SecStr : SSS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSSTTT STT STTHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH :
ExpBur :ebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbebbbebbbebbbbeebeeeeebebbebbbebbeebbeebbeeeeeee:
Contact : b b
queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
:**************************:
7ed5_A_1 928:SVMLTNDNTSRYWEPEFYEAMYTPHT: 953
SecStr :S SSSGGGGSHHHHHTTSSS :
ExpBur :eeeeeeeebeeebeeeebeebbeeee:
Contact : b bb b b
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[assembly_id:1]
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