#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7ed5_A_1_B_1

Protein Model on 7ed5_A_1_B_1 (TEMPLATE: 7ed5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [926 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [150 aa] Non-structural protein 8 :R1AB_SARS2 269D 270L 271L 272K 273Y 323P 324T 326F 328P 329L 330V 331R 332K 338V 340F 341V 365R 368F 371L 374Y 375A 378P 379A 380M 381H 382A 383A 384S 385G 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 404N 405V 407F 447N 509W 514L 515Y 517D 518S 523D 666M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7ed5_A_1 identity=100.0%
queryA         4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
                :****************************************************************************************************:
7ed5_A_1      28:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 127
SecStr          : HHHHHHHS SS  EEEESSSTTS   EEEEEEEE SS EEEEEEEE   B EEEE TTS EEEEEEEEEE  HHHHHHHHHHHHHTTT TTB EEEEEE:    
ExpBur          :eeebbeebbeeeebebeeeeeeeeebebebbbbeeeeebbbbbbbeeeebbbbbbbeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebebbe:    

queryA       104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
                :****************************************************************************************************:
7ed5_A_1     128:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 227
SecStr          :EESSSSEEEEEEEEEE SSBHHHHHHHHHS  SSS HHHHHHHHTTTS  S GGGSTTSS SSSSGGGSTTTGGGHHHHHHHHHHHHHHHHHHHHHTEE :    
ExpBur          :beeeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebeebbbebbeebbebbbebbebbebbeeebbeb:    

queryA       204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
                :****************************************************************************************************:
7ed5_A_1     228:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 327
SecStr          :B  GGGBBTTS B   TT EE STT    B HHHHHHHHHHHHHTTGGGGGGBTTS TTS B    SS    HHHHHHHHHHHSTT  S   SSGGG SS:    
ExpBur          :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeeeeeeeeebbebbeebbeebbebbebebbbbbeebee:    
Contact         :                                                                 bbbbb                              

queryA       304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
                :****************************************************************************************************:
7ed5_A_1     328:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 427
SecStr          :SHHHHHHHHHHHHHTTTS GGGSEEEEE  EETTEE  EEEEEE SSS EE  S   SEES   HHHHHHHHHSHHHHHHTSEE   TT SS EEEESSS:    
ExpBur          :bebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeeeebbbebbbbebbeeeeebebeebebebebbeee:    
Contact         :                   bb b bbbbb     b bb                       b  b  b  bb  bbbbbbbbbbbbbbb   b b b bb

queryA       404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
                :****************************************************************************************************:
7ed5_A_1     428:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 527
SecStr          :S     B   EE HHHHHHHHHTT S TT S     B   B STTHHHHHTTGGG       HHHHHHHHHHHHHHT S       GGG   SSS S   :    
ExpBur          :eeeeeebeeebebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbebbeebeebbbebeebeeeeeeeebb:    
Contact         :bb b                                       b                                                        

queryA       504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
                :****************************************************************************************************:
7ed5_A_1     528:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 627
SecStr          :TTGGGT  HHHHHHHS HHHHHHHHHHHTTS    EEEEEE    BSSS   EEEE  HHHHHHHHHHHSSSSSSSTT  SSS  TT  STTTHHHHHHH:    
ExpBur          :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbebbe:    
Contact         :     b    bb bb    b                                                                                

queryA       604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
                :****************************************************************************************************:
7ed5_A_1     628:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 727
SecStr          :HHHTT SSEEEEEE  TTTTTS  HHHHHHHHHHHTSTTTTTS HHHHHHHHHHHHHHHTS EEEETTEEE   S   TTSS HHHHHHHHHHTTTHHHH:    
ExpBur          :ebbeebeeeebbbbebbebbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbebbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbb:    
Contact         :                                                              b                                     

queryA       704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
                :****************************************************************************************************:
7ed5_A_1     728:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 827
SecStr          :HHHHTTS GGG   HHHHHHHHHHHHHHHT  S  HHHHHTTHHHHHHHEEE  BTTBEEEEEEHHHHHTTSS  HHHHHHHHHHHSS    GGG EEES:    
ExpBur          :bbbbbbbbbeebeeeebbebbbebbebbbeeeeebeebbeebbebbeebbbbbbeeebbbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebbebe:    

queryA       804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
                :****************************************************************************************************:
7ed5_A_1     828:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 927
SecStr          : SSS  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESSSTTT STT STTHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH :    
ExpBur          :ebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbebbbebbbebbbbeebeeeeebebbebbbebbeebbeebbeeeeeee:    

queryA       904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :**************************:
7ed5_A_1     928:SVMLTNDNTSRYWEPEFYEAMYTPHT: 953
SecStr          :S     SSSGGGGSHHHHHTTSSS  :    
ExpBur          :eeeeeeeebeeebeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123