#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [150 aa] | Non-structural protein 8 :R1AB_SARS2 | 269D 270L 271L 272K 273Y 323P 324T 326F 328P 329L 330V 331R 332K 338V 340F 341V 365R 368F 371L 374Y 375A 378P 379A 380M 381H 382A 383A 384S 385G 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 404N 405V 407F 447N 509W 514L 515Y 517D 518S 523D 666M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ed5_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 7ed5_A_1 28:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 127 SecStr : HHHHHHHS SS EEEESSSTTS EEEEEEEE SS EEEEEEEE B EEEE TTS EEEEEEEEEE HHHHHHHHHHHHHTTT TTB EEEEEE: ExpBur :eeebbeebbeeeebebeeeeeeeeebebebbbbeeeeebbbbbbbeeeebbbbbbbeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 7ed5_A_1 128:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 227 SecStr :EESSSSEEEEEEEEEE SSBHHHHHHHHHS SSS HHHHHHHHTTTS S GGGSTTSS SSSSGGGSTTTGGGHHHHHHHHHHHHHHHHHHHHHTEE : ExpBur :beeeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebeebbbebbeebbebbbebbebbebbeeebbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 7ed5_A_1 228:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 327 SecStr :B GGGBBTTS B TT EE STT B HHHHHHHHHHHHHTTGGGGGGBTTS TTS B SS HHHHHHHHHHHSTT S SSGGG SS: ExpBur :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeeeeeeeeebbebbeebbeebbebbebebbbbbeebee: Contact : bbbbb queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 7ed5_A_1 328:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 427 SecStr :SHHHHHHHHHHHHHTTTS GGGSEEEEE EETTEE EEEEEE SSS EE S SEES HHHHHHHHHSHHHHHHTSEE TT SS EEEESSS: ExpBur :bebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeeeebbbebbbbebbeeeeebebeebebebebbeee: Contact : bb b bbbbb b bb b b b bb bbbbbbbbbbbbbbb b b b bb queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 7ed5_A_1 428:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 527 SecStr :S B EE HHHHHHHHHTT S TT S B B STTHHHHHTTGGG HHHHHHHHHHHHHHT S GGG SSS S : ExpBur :eeeeeebeeebebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbebbeebeebbbebeebeeeeeeeebb: Contact :bb b b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 7ed5_A_1 528:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 627 SecStr :TTGGGT HHHHHHHS HHHHHHHHHHHTTS EEEEEE BSSS EEEE HHHHHHHHHHHSSSSSSSTT SSS TT STTTHHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbebbe: Contact : b bb bb b queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 7ed5_A_1 628:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 727 SecStr :HHHTT SSEEEEEE TTTTTS HHHHHHHHHHHTSTTTTTS HHHHHHHHHHHHHHHTS EEEETTEEE S TTSS HHHHHHHHHHTTTHHHH: ExpBur :ebbeebeeeebbbbebbebbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbebbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbb: Contact : b queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 7ed5_A_1 728:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 827 SecStr :HHHHTTS GGG HHHHHHHHHHHHHHHT S HHHHHTTHHHHHHHEEE BTTBEEEEEEHHHHHTTSS HHHHHHHHHHHSS GGG EEES: ExpBur :bbbbbbbbbeebeeeebbebbbebbebbbeeeeebeebbeebbebbeebbbbbbeeebbbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebbebe: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 7ed5_A_1 828:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 927 SecStr : SSS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSSTTT STT STTHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH : ExpBur :ebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbebbbebbbebbbbeebeeeeebebbebbbebbeebbeebbeeeeeee: queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 7ed5_A_1 928:SVMLTNDNTSRYWEPEFYEAMYTPHT: 953 SecStr :S SSSGGGGSHHHHHTTSSS : ExpBur :eeeeeeeebeeebeeeebeebbeeee: |