[pdbjlvh2]Protein Model on 7dok_C_1_A

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7dok_C_1_A_1

Protein Model on 7dok_C_1_A_1 (TEMPLATE: 7dok )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	C 1 (A)	polymer(polypeptide(L)) [925 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		A 1 (P)	polymer(polyribonucleotide)	RNA (5'-R(PGPCPUPAPUPGPUPGPAPGPAPUPUPAPAPGPUPUPAPU)-3')	513R 759S 760D 813C 814S 815Q 836R 840A 849K 857E 858R 861S 862L 865D (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7dok_C_1 identity=100.0%

queryA         5:QSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKF: 104
                :****************************************************************************************************:
7dok_C_1       6:QSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKF: 105
SecStr          : HHHHHHH SS   EEESSSTTS   EEEEEEEE SS EEEEEEEE SEEEEEEE TT  EEEEEEEEEE  HHHHHHHHHHHHHHTT SSB EEEEEEE:    
ExpBur          :eebbeebbeeeebebeeebeeeeebebebbbbeeeeebbbbbbbeeeebbbbbbeeeeeeeeeebbbbbbeeeebbeebeebbeebeebebbbebbbbee:    

queryA       105:RIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV: 204
                :****************************************************************************************************:
7dok_C_1     106:RIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV: 205
SecStr          :ESSSSEEEEEEEEEE SSBHHHHHHHHHS  TTS HHHHHHHHHTTSS GGGTTSTTTT TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTEEEE:    
ExpBur          :eeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbebbebbeebbbebe:    

queryA       205:LTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDD: 304
                :****************************************************************************************************:
7dok_C_1     206:LTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDD: 305
SecStr          :  GGGBBTT  B   SS EE STT   EE HHHHHHHHHHHHHTTGGGGGGBGGG TTS B    TT    HHHHHHHHHHHSTT  S   SSGGG SSH:    
ExpBur          :bbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbebebbbbbeebeeb:    

queryA       305:RCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNN: 404
                :****************************************************************************************************:
7dok_C_1     306:RCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNN: 405
SecStr          :HHHHHHHHHHHHHTTTS TTSSEEEEEEEEETTEEEEEEEEEEETTTEEEE SS  SEESS  HHHHHHHHS HHHHHHHSEE   SS SS EEEE SSS:    
ExpBur          :bbbbbbbbbbbbbbebbeeebbbebeeebebeeeeebbbbbbbbebbbbbebeeeeeebeebeeeeebbbebbbbebeeeeeebebeebebebebbeeee:    

queryA       405:VAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGF: 504
                :****************************************************************************************************:
7dok_C_1     406:VAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGF: 505
SecStr          :     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHTTGGG       HHHHHHHHHHHHHHTSSS      GGG   S SSS   T:    
ExpBur          :eeeeebeeeeebeebeebbeeeebbeeebebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbeebbeebebbebebeebeeeeeeeebbb:    

queryA       505:PFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKT: 604
                :****************************************************************************************************:
7dok_C_1     506:PFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKT: 605
SecStr          :TGGGT  HHHHHHHS HHHHHHHHHHHTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHHH  SSSB TT  STTTHHHHHHHH:    
ExpBur          :bbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebbeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbebbee:    
Contact         :        b                                                                                           

queryA       605:VYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANV: 704
                :****************************************************************************************************:
7dok_C_1     606:VYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANV: 705
SecStr          :HHTT SSEEEEE   TTTTTS  HHHHHHHHHHHHTT TTT  HHHHHHHHHHHHHHHTS EEESSSEEEE      TTSTTHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbbbbbb:    

queryA       705:NALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETD: 804
                :****************************************************************************************************:
7dok_C_1     706:NALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETD: 805
SecStr          :HHHHSS SSS   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS  HHHHHHHHHHHH     TTS EEES :    
ExpBur          :bbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbbebbeebbbbbbebbbbbbbbbbbbbbeeeebbebee:    
Contact         :                                                      bb                                            

queryA       805:LTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYS: 904
                :****************************************************************************************************:
7dok_C_1     806:LTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYS: 905
SecStr          :TTS  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESSSGGGSSSS HHHHHHHHHHTGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS:    
ExpBur          :beebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeebebeeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeebeeeeeeeee:    
Contact         :        bbb                    b   b        b       bb  bb  b                                       

queryA       905:VMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :*************************:
7dok_C_1     906:VMLTNDNTSRYWEPEFYEAMYTPHT: 930
SecStr          :S     S TTTTSTHHHHTTSSS  :    
ExpBur          :eeeebeebeeebeeeebeebbeeee:

Protein Model on 7dok_C_1_A_1 (TEMPLATE: 7dok )

Input Residue Numbers for Focused Sites