[pdbjlvh2]Protein Model on 7doi_A_1_B

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7doi_A_1_B_1

Protein Model on 7doi_A_1_B_1 (TEMPLATE: 7doi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [906 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		B 1 (B)	polymer(polypeptide(L)) [114 aa]	Non-structural protein 8 :R1AB_SARS2	270L 271L 273Y 274D 323P 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 365R 368F 371L 374Y 379A 380M 382A 383A 384S 385G 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 404N 405V 407F 447N 508K 509W 514L 515Y 518S 666M (identity: 100.0 %/97.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7doi_A_1 identity=97.8%

queryA         4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
                :****************************************************************************************************:
7doi_A_1       5:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 104
SecStr          : HHHHHHHHGGG   EEESSSTTS   EEEEEEEE SS EEEEEEEE SEEEEEEE TTS EEEEEEEEE   SHHHHHHHHHHHHHTT TTB  EEEEE:    
ExpBur          :eeebbeebbeeeebebeeebeeeeeeebebbbbeeeeebbbbbbbeeeebbbbbbeeeeeeeeeebbbbbbeeeebbeebeebbeebeebebbbebbbbe:    

queryA       104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
                :****  **********************************************************************************************:
7doi_A_1     105:FRIDXXMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 204
SecStr          :E   -- EEEEEEEEE SSBHHHHHHHHHS  TTS HHHHHHHHHTTSS GGGGGSTT S TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTEEE:    
ExpBur          :beee--eebbbbbbebbebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbeebbeebbebbeebbebbebbeebbbeb:    

queryA       204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
                :****************************************************************************************************:
7doi_A_1     205:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 304
SecStr          :E  GGGBBTT  B   TT EE  TT   EE HHHHHHHHHHHHHTTTTGGGGBGGG TTS B    TT    HHHHHHHHHHH TT  S   SSGGG SS:    
ExpBur          :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbeeebbbbbeebee:    
Contact         :                                                                  bb bb                             

queryA       304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
                :****************************************************************************************************:
7doi_A_1     305:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 404
SecStr          :HHHHHHHHHHHHHHTTTS TTSSEEEEEEEEETTEEEEEEEEEEETTTEEEE S   SEES   HHHHHHHHH HHHHHHHSEE    S SS EEEESSS:    
ExpBur          :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeebebbbbbbbbebeeeeeebebeebebebebbeee:    
Contact         :                   bb b bbbbb     bbbb  b                    b  b  b  b    bb bbbbbbbbbbb   b b b bb

queryA       404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
                :****************************************************************************************************:
7doi_A_1     405:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 504
SecStr          :S     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHGGGGS       HHHHHHHHHHHHHHTTT       STT   S SSS   :    
ExpBur          :eeeeeebeeeeebeebeebbeeeebeeeebebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbbbebeebeeeeeeeebb:    
Contact         :bb b                                       b                                                        

queryA       504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
                :****************************************************************************************************:
7doi_A_1     505:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 604
SecStr          :TTGGGT  HHHHHHHS HHHHHHHHHHTTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHHT  SSSB TT  STTTHHHHHHH:    
ExpBur          :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebebebebbbbbbbbbebbbbebbeebeeeeebbbbbeeebeebbbbebbe:    
Contact         :    bb    bb  b                                                                                     

queryA       604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
                :****************************************************************************************************:
7doi_A_1     605:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 704
SecStr          :HHSSS SSEEEEE   TTTTTS  HHHHHHHHHHHGGG TTT  HHHHHHHHHHHHHHHTS EEESSSEEEE  SS  TTSTTHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbb:    
Contact         :                                                              b                                     

queryA       704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
                :****************************************************************************************************:
7doi_A_1     705:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 804
SecStr          :HHHHHSS GGG   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHTTS    TTS EEES:    
ExpBur          :bbbbbbbbbeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebe:    

queryA       804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
                :********************************************************************************************        :
7doi_A_1     805:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXX: 904
SecStr          : TTS  S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSTTSSSSSSHHHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHS  --------:    
ExpBur          :ebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeebeeeeebbeebbebbbebbbbeeeeeeebbebbebbbebbeebeeee--------:    

queryA       904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :          ****************:
7doi_A_1     905:XXXXXXXXXXRYWEPEFYEAMYTPHT: 930
SecStr          :----------  SSTHHHHTTTSS  :    
ExpBur          :----------eeeeeebbeebbeeee:

Protein Model on 7doi_A_1_B_1 (TEMPLATE: 7doi )

Input Residue Numbers for Focused Sites