#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7b3b_A_1_B_1

Protein Model on 7b3b_A_1_B_1 (TEMPLATE: 7b3b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [814 aa] RNA-directed RNA polymerase nsp12 :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [115 aa] Non-structural protein 8 :R1AB_SARS2 270L 271L 272K 273Y 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 344T 368F 371L 372L 374Y 378P 379A 380M 381H 382A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 405V 407F 506F 508K 509W 514L 515Y 518S 519M 523D (identity: 100.0 %/97.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7b3b_A_1 identity=97.8%
queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------: 117
                :********************                                                                                :
7b3b_A_1      34:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX:  66
SecStr          : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------:    
ExpBur          :eeebbbbeeeebbbbbebee--------------------------------------------------------------------------------:    

queryA       118:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163
                :                                                      **********************************************:
7b3b_A_1      67:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 166
SecStr          :------------------------------------------------------   SSBHHHHHHHHHS BTTB HHHHHHHHHTTSS HHHHHSTTSS:    
ExpBur          :------------------------------------------------------eebebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebb:    

queryA       164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263
                :****************************************************************************************************:
7b3b_A_1     167:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 266
SecStr          : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B  GGGBBTTS B   SS EE STT    B HHHHHHHHHHHHHTTGGGGGGBGGG SSS:    
ExpBur          :bbbebeebbebbeebbbebbebbeebbebbeebeeebeebbbbbbbbbbebebebeeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeee:    

queryA       264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 363
                :**************************************************************************************************  :
7b3b_A_1     267:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 366
SecStr          : B    TT    HHHHHHHHHHHSTT  S   SSGGG SSHHHHHHHHHHHHHHHTTS SSSSEEEEEEEEETTEEEEEEEEEEETTTEEEE TT   --:    
ExpBur          :eeeeeeeeeeebbebbeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeee--:    
Contact         :      bbbb                                                  bbb bbbbb     bbb   b                   

queryA       364:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463
                :   *************************************************************************************************:
7b3b_A_1     367:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 466
SecStr          :--- HHHHHHHHHSHHHHHHTSEE   TT SS EEEESSSS     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHHGGGG     :    
ExpBur          :---eeeeebbbebbbbebeeebeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbeeeeebebebebeebeeebbbebbbebebbbebb:    
Contact         :    b  bb b   bbbbb b bbbbbbb   b b b bb b b                                                        

queryA       464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563
                :****************************************************************************************************:
7b3b_A_1     467:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 566
SecStr          :  HHHHHHHHHHHHHTTSSS      GGG   S SSSB  TTGGGT BHHHHHHHS HHHHHHHHHHHTTS    EEEEEE    BSSS   EEEE  HH:    
ExpBur          :bbbbbbbbbbbbbbebbeebebbebebeebeeeeeeeebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebebebebbbb:    
Contact         :                                          b bb    bb  bb   b                                        

queryA       564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663
                :****************************************************************************************************:
7b3b_A_1     567:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 666
SecStr          :HHHHHHHHHHHHHHHHHT  SSSB TT  STTTHHHHHHHHHTTT SSEEEEE   TTHHHH  HHHHHHHHHHHHTT TTT  HHHHHHHHHHHHHHTT:    
ExpBur          :bbbbbebbbbebbebbeeeeebbbbbebebeebbbbebbeebbeebeeeebbbbebbbbebbbbbbbbbbbbbbbbeebeeebeeeebbbbbbbbbbbbb:    

queryA       664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763
                :****************************************************************************************************:
7b3b_A_1     667:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 766
SecStr          :T EEESSSEEEE  SS  SSSTTHHHHHHHHHHHHHHHHHHHHHHHS SSS   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEE SS EE:    
ExpBur          :bbbbbbebbbbbbebbbbeebebeebbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebb:    

queryA       764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863
                :****************************************************************************************************:
7b3b_A_1     767:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 866
SecStr          :EEEEHHHHHHTSS  HHHHHHHHHHTT     GGG EEES TTT  S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSSTTSSSSHHHHHHHHHH:    
ExpBur          :bbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbeeeeeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebeeeebbeebbebb:    

queryA       864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :*********************************             ********************:
7b3b_A_1     867:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 932
SecStr          :HHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHH ------------- TTHHHHSTHHHHHTTSTT :    
ExpBur          :bebbbbeebeeeebbebbebbbebbeebeeeee-------------eebeeebeeeebeebbeeee:    


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