[pdbjlvh2]Protein Model on 6m71_A_1_D

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6m71_A_1_D_1

Protein Model on 6m71_A_1_D_1 (TEMPLATE: 6m71 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [859 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		D 1 (B)	polymer(polypeptide(L)) [113 aa]	Non-structural protein 8 :R1AB_SARS2	270L 271L 273Y 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 368F 371L 374Y 375A 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 391K 392R 398V 400A 402T 403N 404N 405V 407F 505P 506F 509W 514L 515Y 518S 666M (identity: 100.0 %/95.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6m71_A_1 identity=95.2%

queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA: 130
                :********************                  ****** ***************************         *******************:
6m71_A_1      31:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXYFVVKRXTFSNYQHEETIYNLLKDCPAVAKHDFFXXXXXXXXXPHISRQRLTKYTMADLVYA: 130
SecStr          :  EEEEEESSS EEEEEE  ------------------      - HHHHHHHHHHHHHT S TTB  EE  ---------   EE S  SSBHHHHHHH:    
ExpBur          :eeebebeeeeebbbbbebee------------------ebeebe-eeeeeeebeebbeebeebebbbebebe---------eebbbeebbebbbbbbbbb:    

queryA       131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
                :****************************************************************************************************:
6m71_A_1     131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
SecStr          :HHS  SSS HHHHHHHHHTTSS GGGGGSTTSS SSS TTHHHHHGGGHHHHHHHHHHHHHHHHHHHHTTEEEE  GGGSBTTS B    S EE  TT  :    
ExpBur          :bbbbeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbebbbebbebbeebbbebbbbbbbbbbebbbbebeebeeeeeeeb:    

queryA       231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
                :****************************************************************************************************:
6m71_A_1     231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
SecStr          : EE HHHHHHHTHHHHHTTTTGGGGBTTS TTS B    TT    HHHHHHHHHHH TT  S   SSTTS SSHHHHHHHHHHHHHHGGGS GGGSEEEE:    
ExpBur          :ebebbbbbbbbbbbbbbbebbebbebeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbebeebeebbbbbbbbbbbbbbbebbeeebbeebe:    
Contact         :                                       bb b                                                 bbbb bbb

queryA       331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
                :****************************************************************************************************:
6m71_A_1     331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
SecStr          :EEEEETTEEEEEEEEEEETTTEEE  S    SBS   HHHHHHHHS HHHHHHSSEE   TT SS EEEE SSS   B B   EE HHHHHHHHHTT S :    
ExpBur          :eebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebbebbbebbbbeeeeeeeebebeebebebebbeeeeeeeeebeeeeebeebeeebeeeebbe:    
Contact         :bb     bbbb                          b  b  bb   bbbbbb bbbb bb     b b bbbb b                       

queryA       431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
                :****************************************************************************************************:
6m71_A_1     431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
SecStr          :TT SS    B   B SBTHHHHHGGGGG       HHHHHHHHHHHHHHTTTS      GGG     TTS   TTGGGT  HHHHHHHS HHHHHHHHHH:    
ExpBur          :eebebeeebebeebeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebebbbbebeebeeeeeeeebbbbbeeeeebeebbeebeeeebeebbeb:    
Contact         :                                                                          bb  b    bb  b            

queryA       531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
                :****************************************************************************************************:
6m71_A_1     531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
SecStr          :HTTS    EEEEEE    BSS    EEEEE HHHHHHHHHHHHHHHHHHHT  SSSB  S  STTTHHHHHHHHHTSS SSEEEEEE  TTHHHH  HHH:    
ExpBur          :bbebbbbbbbbbebeebebeeeebebebbbbbbbbbbbbbbbbebbeebbeeeebbbbbebebebbbbbebbeebbeebeeeebbbbebeebebbbbbbb:    

queryA       631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
                :****************************************************************************************************:
6m71_A_1     631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
SecStr          :HHHHHHHHHTT SSS  HHHHHHHHHHHHHHHTS EEEETTEEEE  S   TTSTTHHHHHHHHHHHHHHHHHHHHHHSS TTS   SHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbebbebbebbbbbbbbbbbbbbbbbbbbbbbbeebeeeebeebbbebbeb:    
Contact         :                                   b                                                                

queryA       731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
                :****************************************************************************************************:
6m71_A_1     731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
SecStr          :HSS  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHHS    TTS  EE  SSS  S SSS EEEEEE SSSEEEEE:    
ExpBur          :bbeeeeeeeebbeebeebbeebbbbbbebeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebbbbebeeeeeebbbb:    

queryA       831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTV: 930
                :*****************************************************************               ********************:
6m71_A_1     831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXXXXXXNTSRYWEPEFYEAMYTPHTV: 930
SecStr          :E  HHHHHHHHHEE SSTTS HHHHHHHHHHHHHHHGGGGGSS HHHHHHHHHHHHHHHHHHHH ---------------  S TTSTHHHHGGG TTS :    
ExpBur          :bbebbebbbbbbbbeeebeeeeeebbeebbebbbebbbbeeeeeeebbebbebbbebbeebeeee---------------eeeeeeeeebbebbbbeeee:    

queryA       931:LQ: 932
                :**:
6m71_A_1     931:LQ: 932
SecStr          :  :    
ExpBur          :ee:

Protein Model on 6m71_A_1_D_1 (TEMPLATE: 6m71 )

Input Residue Numbers for Focused Sites