[pdbjlvh2]Protein Model on 8cgw_A_1_W

Protein Model on 8cgw_A_1_W_1 (TEMPLATE: 8cgw )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [858 aa]	Leucyl-cystinyl aminopeptidase, pregnancy serum form :LCAP_HUMAN
2	b		W 1 (A)	non-polymer(PEG)	DI(HYDROXYETHYL)ETHER	644T(H) 647Q(K) 648R(I) (identity: 0.0 %/36.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8cgw_A_1 identity=36.1%

queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170
                :*   ***    *  *   * * **        * ** *        *  ** **   *       **       **       *         *     *:
8cgw_A_1       9:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSAVSSQEKQAEILEYAYHGQIAIVAPE-AL:  97
SecStr          :  SSS  SSEEEEEEEEEEEE SSS-----SEEEEEEEEEEEESS EEEEEEE  S EEE-----EEEEEETT SS EE  EEEETTTTEEEEEEEE-EE:    
ExpBur          :eeeeebbebbebeebebebebebee-----eebebebebebebeeeeeebbbbbeebeee-----ebbbebeeeeeebebeeeeeeebbbbbbebee-eb:    

queryA       171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269
                :     *    *          ***   *  * *  *  * **     **  ******** ** * *  *     ****** **  *  *  *      **:
8cgw_A_1      98:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQDEF: 194
SecStr          : TT EEEEEEEEEEE BSSSSEEEEEEEE SSS EEEEEEEE TTTTHHHHS B  STTS BEEEEEEEE TTSEEEESS- EEEEEE --TTS EEEEE:    
ExpBur          :eeeeebebbbebebebeeeeebbbbbebeeeeeeeebbbbbbbbbbbbbebbbbbbbbebbbbbbbebbbeeebebbbbb-eeeeeeee--eeebbebbb:    

queryA       270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369
                :    ****** **** *      *  ** *  * * *  *   *  ***  *   * **       *** * *    *** ********* * **  ** :
8cgw_A_1     195:SESVKMSTYLVAFIVGEMKNLS-QDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 291
SecStr          :    SB GGG  EEEE  EEEE-EEETTEEEEEEE GGGGGG H--HHHHHHHHHHHHHHHHHTS  SSSEEEEEEESSTT      SSEEEEEHHHH  :    
ExpBur          :eebeebbbbbbbbbbbbbeeee-eeeeebebbbbbbeeebeebe--bbbebbbebbebbbebbebebebebbbbbbbbbeebbebbbbbbbbbebebbbb:    

queryA       370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465
                :*   **      *   ***************  ************   **            * *    *        *  * * **** *   *     :
8cgw_A_1     292:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 383
SecStr          : TTTS HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHS----- GGG THHHHHHHHHHHHHHHSSTT   SS---    SH:    
ExpBur          :eeeebbbeebbebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebebbebbbebbeebbbebbeebb---eebeee:    

queryA       466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563
                : ** * **  ** ** * * **   ******      ***   *       ***   * * *        *   *  **** ***  **      *   *:
8cgw_A_1     384:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNE-VTNQTLD----VKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 478
SecStr          :HHHTTS  HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE HHHHHHHHHH-HTTTSS ----HHHHHHHHHSSSS EEEEEEE SSEEEEEE:    
ExpBur          :eebeebeeeebbebbbbbbbbbbeebeeeebbebbbebbeebeeeebebeebbebbbe-ebeeeee----bebbbebbbebebbbbbebebeebebebeb:    

queryA       564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661
                :* * *             * *  *            *               *    **  * *  *** * *    *     **           **  :
8cgw_A_1     479:ERFFLNMKXXXXXXXT-SYLWHIPLSYVTEXXXYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 577
SecStr          :EE      ------- -     B  EEEE ---   EEEE  B SSEEEEE SS  S EEESGGG SS EEEE HHHHHHHHHHTTS GGGS HHHHHHH:    
ExpBur          :eebebebe-------e-eeebebbbbbbbe---eeeeeeebebeeeebebebeeebebbbbbbebbbbbbbbbbeebbeebbebbeeebeebebbbbbbb:    
Contact         :                                                                                  b  bb             

queryA       662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751
                :**  * **   ***   *      *  *    *   **       *     *  * *       **  *    *           *   **    *    :
8cgw_A_1     578:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 671
SecStr          :HHHHHHHHHTTSS HHHHHHHGGGGGG   HHHHHHHHHHHH---HHHHHHHHHT H-HHHHHHHHHHHHHSHHHHHT  SSS S TTHHHHHHHHHH--:    
ExpBur          :bbbbbbbbbbeebebebbbebbebbeebeebbbbebbbebbe---ebbbbbbbeeee-eebeebbeebbebbeebbeebeeeeeeebbebebbbebbe--:    

queryA       752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851
                :        **      *      **  **              **            * *            *  *   *** *     *       ** :
8cgw_A_1     672:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 762
SecStr          :-------HHHHTT TTHHHHHHHHHHHHHHTTT S   HHHHHHHH--HHHTTSHHHHHHHHHHHTT   TTHHHHHHHHHTT S HHHHHHHHHHHHTT:    
ExpBur          :-------bbbebebeebeeebeeebeebbeeeeeeebbbbbbbbbb--bbbbeeeebbebbbebbeeeeebeebebbbebbbbbeeeebbeebbebbbee:    

queryA       852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951
                :*  * *     *        *  * ****  ** **      **    *     *  ***   *     *     *  *    *    ***    ** * :
8cgw_A_1     763:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 860
SecStr          :SSS GGGHHHHHHHHHTSGGGHHHHHHHHHHTHHHHHHHS TTSHHHHHHHHHTTTT  SHHHHHHHHHHHHTT HHHH--TSHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeeebbbebbebbbeeeebbebbbebbeebbeebeeebeeebeebebbbebbbebbbeeeebeebeebbeeeeeebb--eeebbebbbbebebbbbbb:    

queryA       952:KENKEVVLQWF: 962
                :  *      * :
8cgw_A_1     861:EKNLKSLTWWL: 871
SecStr          :HHHHHHHHHHT:    
ExpBur          :eebbeebeebb:

Protein Model on 8cgw_A_1_W_1 (TEMPLATE: 8cgw )

Input Residue Numbers for Focused Sites