Protein Model on 8cgp_B_1_O_1 (TEMPLATE: 8cgp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(AMPN_HUMAN) B 1 (B) polymer(polypeptide(L)) [859 aa] Leucyl-cystinyl aminopeptidase, pregnancy serum form :LCAP_HUMAN
2 b O 1 (O) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 185E(N) (identity: 0.0 %/36.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8cgp_B_1 identity=36.3%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170
                :*   ***    *  *   * * **        * ** *        *  ** **   *       **       **       *         *     *:
8cgp_B_1       9:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSXXSSQEKQAEILEYAYHGQIAIVAPE-AL:  97
SecStr          :   SS  SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE  SEEEE-----EEEE  --    EE EEEEETTTTEEEEEEEE-EE:    
ExpBur          :eeeeebeebbebeebbbebebebee-----eebebebebebebeeebeebbbbbeebeee-----ebbbee--eeeeeebeebeeeebbbbbbbbee-bb:    

queryA       171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269
                :     *    *          ***   *  * *  *  * **     **  ******** ** * *  *     ****** **  *  *  *      **:
8cgp_B_1      98:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQDEF: 194
SecStr          : TT EEEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTT HHHHS B  STT  BEEEEEEEE SSSEEEESS- EEEEEE --SSS EEEEE:    
ExpBur          :eeeeebebbbebbbebeeebebbbbbebeeeeeeebebbbbbbbbbbbbebbbbbbbbebbbbbbbebbbeeebebbbbb-eeeeeeee--eeeebebeb:    
Contact         :              b                                                                                     

queryA       270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369
                :    ****** **** *      *  ** *  * * *  *   *  ***  *   * **       *** * *    *** ********* * **  ** :
8cgp_B_1     195:SESVKMSTYLVAFIVGEMKNLS-QDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 291
SecStr          :    SB GGG  EEEE  EEEE-EEETTEEEEEEE GGGGGG H--HHHHHHHHHHHHHHHHHT    SSEEEEEEESS SSSEE  TTEEEEEHHHH  :    
ExpBur          :eebeebbbbbbbbbbbebeeee-eebeebebbbbbbeebeebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbeeebbbbbbbbbbbbbbbbb:    

queryA       370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465
                :*   **      *   ***************  ************   **            * *    *        *  * * **** *   *     :
8cgp_B_1     292:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 383
SecStr          : TTT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH----- GGG THHHHHHHHHHHHHHHTSTT   SS---    SH:    
ExpBur          :eeeebbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebebbebbbebbeebbbebbbebb---bebeee:    

queryA       466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563
                : ** * **  ** ** * * **   ******      ***   *       ***   *  *         *   *  **** ***  **      *   *:
8cgp_B_1     384:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVTNQ-----TLDVKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 478
SecStr          :HHHHHTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE HHHHHHHHHHHSTT-----S  HHHHHHHHHHS S EEEEEEEETTEEEEEE:    
ExpBur          :eebbbbbbbbbeebbbbbbbbbbeebeeeebbebbbebbeebeeeebebeebbebbbeebee-----eeebeebbebbbebebbbbbbbeeeeeebebeb:    

queryA       564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661
                :* * *             * *  *      **    *               *    **  * *  *** * *    *     **           **  :
8cgp_B_1     479:ERFFLNMKXXXXXXXT-SYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 577
SecStr          :EE      ------- -     EEEEEEEEETTS EEEEEEEE SSEEEEE SS EEEEEESSTT SSSEEEE HHHHHHHHHHHHH GGGS HHHHHHH:    
ExpBur          :ebbeeeee-------e-eeebbbbbbbbbbbeeeeeeebeeebeeeeeebebeeebebbbbbbebbbbbbbbbeeebbebbbebbeeebebbebbbbbbb:    

queryA       662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751
                :**  * **   ***   *      *  *    *   **       *     *  * *       **  *    *           *   **    *    :
8cgp_B_1     578:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 671
SecStr          :HHHHHHHHHTTSS HHHHHHHHTTGGG   HHHHHHHHHHHH---HHHHHHHHTT H-HHHHHHHHHHHHHTHHHHHT  SS  S HHHHHHHHHHHH--:    
ExpBur          :bbbbbbbbebeebebebbbebbebbeebeebbbbebbbebbe---bbbbbbbbeeee-ebbeebbeebbebbeebbeeeeeeeeeebbebbbbeebbe--:    

queryA       752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851
                :        **      *      **  **              **            * *            *  *   *** *     *       ** :
8cgp_B_1     672:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 762
SecStr          :-------HHHHTT TTHHHHHHHHHHHHHHTTT S   GGGHHHHH--HHHTTSHHHHHHHHHHHHH S HHHHHHHHHHHTT S HHHHHHHHHHHHHT:    
ExpBur          :-------bbbebebeebeeebeeebeebbeeeeeeebebbbbbbbb--bbbbeeeebbebbbebbeeeebbbbbbbbbebbbbbeeeebbeebbebbbee:    

queryA       852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951
                :*  * *     *        *  * ****  ** **      **    *     *  ***   *     *     *  *    *    ***    ** * :
8cgp_B_1     763:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 860
SecStr          :SSS GGGHHHHHHHHHHSTTTHHHHHHHHHHTHHHHHHHS TT HHHHHHHHHHHTT  SHHHHHHHHHHHHTT HHHH--SSHHHHHHHHHHHHHHHHH:    
ExpBur          :eebebbbbbebbebbbeeeebbeebbebbbebbeebeeebeebbebbbbbbebbbebbbeeeebeebeebbeeeeeebb--ebebbebbbbebbbbbebb:    

queryA       952:KENKEVVLQWF: 962
                :  *      * :
8cgp_B_1     861:EKNLKSLTWWL: 871
SecStr          :HHHHHHHHHHT:    
ExpBur          :eebbeebeeeb:

Input Residue Numbers for Focused Sites

ex) 2,15,123