Protein Model on 7z28_A_1_R_1 (TEMPLATE: 7z28 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [859 aa] Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN
2 b R 1 (A) non-polymer(EDO) 1,2-ETHANEDIOL 371P(A) 372L(E) 374S 742E(D) 750Q(R) 790P(V) (identity: 16.7 %/36.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7z28_A_1 identity=36.8%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169
                :**  ***    *  *       **        * *   *  *    *  ** **  *     *  *  **   *          *  *       *    :
7z28_A_1       5:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKGAGERLSEEPLQVLEHPRQEQIALLAPEP:  94
SecStr          :   SS  SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS  SEEEEE SS -----EEEEEEEEESSSSS  EEE EEEEETTTTEEEEE SS :    
ExpBur          :beeeebbeebebebbbbbbebebee-----ebbebbbebebebeeebeebbbbbbeb-----eeeebbbeebeeeeeeeeebeeeeeeebbbbbbebeee:    

queryA       170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPEDPNW: 264
                :*     *       * *     *** * *   **  *   * **     **  ******** ** * *         * *** * *       * **   :
7z28_A_1      95:LLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIED---: 190
SecStr          :  TT  EEEEEEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTGGGTS B  STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEEE---:    
ExpBur          :beeeeebbbbbebebebbebbbbbbebebebeeeeee-ebbbbbbbbbbbbbbbbbbbbbebbbbbbbbbebeeebebbbbbeeeeeeeeeeebbbb---:    

queryA       265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364
                :    *  * ****** *** * *  * *    **     * *  *     ****      * *       ****** *    ***  ******** ****:
7z28_A_1     191:---HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRE: 285
SecStr          :---EE    SB GGG  EEEE  EEEEEE TTS EEEEEE GGGG--GG HHHHHHHHHHHHHHHHHHT    SSEEEEEEESS SSSEE  TTEEEEEH:    
ExpBur          :---ebeebeebbbbbbbbbbbebeeeeeebeeebebbbbbbebbb--ebbebbbebbbebbbbbbebbebebebebbbbbbbbbbbeebbbbbbbbbbbb:    

queryA       365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464
                :  ****   ** * *       ************** *************   *        *     *          * **** **** ***      :
7z28_A_1     286:SALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP---VEN: 381
SecStr          :HHH   TTT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGT-HHHHHHHHHHHTSTT   SS  ---  S:    
ExpBur          :ebbbbeeeebbbebebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeebb-bbebbebbebbbbebbbebbbe---bee:    
Contact         :      bb b                                                                                          

queryA       465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGT---L: 561
                :**** * **  ** ***  * **   ** * ** *   **    * **    ***                *   ** **** *** **  *  *     :
7z28_A_1     382:PAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASISGD--------VKTMMNTWTLQKGFPLITI-TVRGRNVHM: 472
SecStr          :HHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHTT    -------- HHHHHHHHSS SEEEEEE-EEETTEEEE:    
ExpBur          :beebbbbbbebbebbbbbbbbbbeeeeeeeebeebbbebbeebeeebbebeebbebbeeeeee--------beebbebbbebbbbbbbbb-beeeeebeb:    

queryA       562:SQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661
                : ***                * * ** * *          *        *      **   *    *** * *    *      *   * *     **  :
7z28_A_1     473:KQEHYM---------KGDTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASL: 562
SecStr          :EEEEE ---------         EEEEEEETTEEEEEEEEE SSE-EEEE SS  S EEESGGG SS EEEETTTHHHHHHHHHHHHGGGS HHHHHHH:    
ExpBur          :ebebbe---------eeeeeeebbbbbbbbbeeeeeeeeeebeeee-eebebeeeeebbbbbbbbebbbbbbbeeebbeebbebbeeebeebeebbbbbb:    

queryA       662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAIS: 758
                :** ** * *  *     **   * *  *   **    *  *    ***   *  **    *  *      *          *                  :
7z28_A_1     563:INNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQTWTD-EGSVSERMLRSQLLL: 656
SecStr          :HHHHHHHHHTTSS HHHHHHHHGGGGG   HHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHHHHH-----HH  SS - S HHHHHHHHHHHH:    
ExpBur          :bbbbbbbbeeeebebeebbebbebbeebeebbbbebbbebbeebbbbbbbeebeebbeebbebbbebbeebb-----eebebee-eeebeebbbbbebbb:    
Contact         :                                                                                   b       b        

queryA       759:TACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQD: 858
                : **      *     * *  * *   *          *   *      * ***            *      **        *   *      * *  * :
7z28_A_1     657:LACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQE: 754
SecStr          :HHHHTT HHHHHHHHHHHHHHHHTTTTT   HHHHHHHH--HHHTTSHHHHHHHHHHHTT   HHHHHHHHHHHTT   HHHHHHHHHHHHHTSSS GGG:    
ExpBur          :bbbebebeebbeebebebeebeeeeeeeebbbbbbbbbb--bbbbeeeebbebbbeebeebebbbbeebbbebbbbbeeeebbeebbebbeebeebbbbb:    
Contact         :                               b                                                                    

queryA       859:ATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVV: 958
                :       *  *  *  * * *   ** **      ** *        *  ***   *     *     *   **  *   *  *    ** *   *    :
7z28_A_1     755:FPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--GSQLRCVQQTIETIEENIGWMDKNFDKI: 852
SecStr          :HHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHH TT HHHHHHHHHHHTT  SHHHHHHHHHHHHTTGGG--TTT HHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbebbbbbbebeebbebbbebbeeebeebbeebebbbebbeebbebbbbbbbeeeebeebeebbeebeee--beebebbebbbbbbebbbebbeebeeeb:    

queryA       959:LQWF: 962
                :  * :
7z28_A_1     853:RVWL: 856
SecStr          :HHHH:    
ExpBur          :eebb:

Input Residue Numbers for Focused Sites

ex) 2,15,123