Protein Model on 7pfs_B_1_D_1 (TEMPLATE: 7pfs )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) B 1 (B) polymer(polypeptide(L)) [872 aa] Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN
2 b D 1 (D) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 288D(H) 306P 307S(D) 309I(R) (identity: 25.0 %/36.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7pfs_B_1 identity=36.4%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163
                :*   ***    *  *     * **  *     *  *         **  ** *** *   * **      *    *        *      *  * * * :
7pfs_B_1      64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157
SecStr          :  SSS  SSSEEEEEEEEEEEETTTTE-----EEEEEEEEEE  S EEEEEEE  S EEEEEEEEESSSGGG TT EE EEEEEGGGTEEEEEEE-EEE :    
ExpBur          :eeeeebbeebebebbebbbebebeeee-----bebebebbbebeeebeebbbbbeebeeeebbbebeebeebbeeebebeebebeebbbbbbebe-bebe:    

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259
                : ***        *     *   * *   *** * *   *      * *      **  *******  ** * *         ***** **     *    :
7pfs_B_1     158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248
SecStr          :TT E--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B  STT  B  EEEEEE TT EEEESS- EEEEEE TTS :    
ExpBur          :eebe--------bebbbebeeebeeeeebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbbbebeeebebbbbb-eeeeeeeeeeee:    

queryA       260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358
                : **       * ** ****** * **  *       * **   * * *      *  ***      * *     *  *** * * *  ***  *******:
7pfs_B_1     249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340
SecStr          :EEE------EE    SB GGG  EEEE  EEEEEE TTS EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT    SSEEEEEEESS SSSEE  TT:    
ExpBur          :bbb------ebeebeebbbbbbbbbbbbbeeeebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbeeebbbbbb:    
Contact         :                             b                 bb b                                                 

queryA       359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458
                :* **** ******  ** * *  *  **************** ***** ******* * *        *     *   **    *   * * ** * * *:
7pfs_B_1     341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439
SecStr          :EEEEEGGGT   TTT  HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG  TTTT-HHHHHHHHHHHTSTT   SS  :    
ExpBur          :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee:    

queryA       459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538
                :*    ** ** * **  ** ***  * **  ** *  *  *   **  * * *     **  *                                  *  :
7pfs_B_1     440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAEVKE: 536
SecStr          : --- SHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE HHHHHHHHS  ----------------------------  HHHH:    
ExpBur          :b---eeeeebbbbbbebbebbbbbbbbbbeeebeeebbeebbbebbeebeebbbebeebbebbbee----------------------------eeebbe:    

queryA       539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631
                : *  **** * *   *  *     * ** **      **     *     * *  * *                     *       **  *    *** :
7pfs_B_1     537:MMTTWTLQKGIPLLVVKXDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSXXSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632
SecStr          :HHHHHHSS SEEEEEE -  S   EEEEEE SS  SSSTT---GGGG SS    B  EE --  SS EE  B SSE-E    SS  S    SGGG SSSE:    
ExpBur          :bbebbbebbbbbbbbbb-eeeebebbbbbbbbbbbeeeee---eeebeeeeebbbbbbeb--eeeeeeeebbeeee-eebeeeeeeeeebbbbebebbbb:    

queryA       632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728
                :* *    *      *   *       *   * * * *  *       **     *  *         ** *  *  * **   *      * **     *:
7pfs_B_1     633:VHYEGHGWDQLXXXLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMXXXLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732
SecStr          :EEESSSSGGG ---  S  TTS HHHHHHHHHHHHHHHHHTSS SGGGG  --- TT   HHHHHHHHHHHHHHHHHHHTTT HHHHHHHHHHHHHHTHH:    
ExpBur          :bbbeeeebeee---eeeebeebeeebbbbebbbbbbbbbbeeeebeebbee---eeebeebebbbbebeebbebbebbebeeeeebbeebbeebbeebbe:    

queryA       729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828
                :           *        *          **      *      ** ****      *       **           *    **        *  * :
7pfs_B_1     733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824
SecStr          :HH-----HH  SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHTS S   GGGHHHHH--HHTTSSHHHHHHHHHHHHH S HHHHHHH:    
ExpBur          :bb-----eebebee-eeebbebbbbeebbebbbeeeeeebeeebeebbeebeeeeeeeebbbbbbebbb--bbbbeeeebbebbbeebeebbbbbbbebb:    

queryA       829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928
                :  **  **    *            *  *        *     ** * ****  **  *      **      *   *  **    **    *    *  :
7pfs_B_1     825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924
SecStr          :HHHHHT   HHHHHHHHHHHHH TTTTGGGHHHHHHHHTTSHHHHHHHHHHHHHSHHHHHHHS SSSHHHHHHHHHHHTT   HHHHHHHHTTTTTTTTT:    
ExpBur          :bbbbbbbeeeebbebbbeebbebeebebbbbbebbebbbeeeebbebbbebbeeebeebeeebebbbebbbebbebbbeebbeeebbeebbebbeebeee:    

queryA       929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWF: 962
                :  **        **    ****   *      * :
7pfs_B_1     925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWL: 956
SecStr          :--T   THHHHHHHHHHHHHHHHHTTHHHHHT  :    
ExpBur          :--ebebebbebbbebbebbbebbeebbeebeeee:    


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