[pdbjlvh2]Protein Model on 7nup_A_1_IA

Protein Model on 7nup_A_1_IA_1 (TEMPLATE: 7nup )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [915 aa]	Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN
2	b		IA 1 (A)	non-polymer(BR)	BROMIDE ION	740W (identity: 100.0 %/36.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7nup_A_1 identity=36.7%

queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLSQGHRVVLRGVGGSQP----PDIDKTELVEPTEYLV: 163
                :*   ***    *  *     * **  *     *  *         **  ** *** *   * **           *        *      *  * * * :
7nup_A_1      64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157
SecStr          :   SS  SSEEEEEEEEEEEE SSS E-----EEEEEEEEEEE S  SEEEEE  S EE   EEEESSSGGG TT EE EEEEEGGGTEEEEE S-S   :    
ExpBur          :eeeeebbeebebbebebbbebebeeee-----bebebebebebeeebeebbbbbeebebeebbbbbeebeebeeeeeebebbebeeebbbbbebe-eebe:    

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259
                : ***        *     *   * *   *** * *   *      * *      **  *******  ** * *         ***** **     *    :
7nup_A_1     158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248
SecStr          :TTEE--------EEEEEEEEEE B SSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B  STTS BEEEEEEEE TTSEEEESS- EEEEEE TTS :    
ExpBur          :eeee--------bebbbebebebeeebebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee:    

queryA       260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358
                : **       * ** ****** * **  *       * **   * * *      *  ***      * *     *  *** * * *  ***  *******:
7nup_A_1     249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340
SecStr          :EEE------EE    SB GGG  EEEE  EEEEEE TT  EEEEEE GGGGGG H--HHHHHHHHHHHHHHHHHTS   SSEEEEEEESS SSSEE  TT:    
ExpBur          :bbb------ebeebeebbbbbbbbbbbbbeebebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb:    

queryA       359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458
                :* **** ******  ** * *  *  **************** ***** ******* * *        *     *   **    *   * * ** * * *:
7nup_A_1     341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439
SecStr          :EEEEEGGGT   TTT  HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGTT-HHHHHHHHHHHTSTT   SS  :    
ExpBur          :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbbbbeebbbeebbebbbe:    

queryA       459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEA----------VNNRSIQLPTT----------VRD: 538
                :*    ** ** * **  ** ***  * **  ** *  *  *   **  * * *     **  *             *                    *  :
7nup_A_1     440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKE: 536
SecStr          : --- SHHHHHHT SHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHHT  SS   STT SSSSS    HHHHHHHHHHHHHHH:    
ExpBur          :b---eeeeebbbbbeebbebbbbbbbbbbbeebeeeebbbbbbebbeebeeebbebeebbebbbebbeeeeeeebbebeeeeeeeeebeebeeebeebee:    

queryA       539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631
                : *  **** * *   *  *     * ** **      **     *     * *  * *                     *       **  *    *** :
7nup_A_1     537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632
SecStr          :HHHHHHHS SEEEEEEEEETTEEEEEEEEE SS  SSSTT---TTTTSSS    EEEEEEETTEEEEEEEEE SSE-EEEE SS  S EEESGGG SSSE:    
ExpBur          :bbebbbebebbbbbbbbeeeeebebebbbbbbeeeeeeee---beeebeeeebbbbbbbbbeeeeeeeeebbeeee-eebebeeebebbbbbbbbbbbbb:    

queryA       632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728
                :* *    *    ***   *       *   * * * *  *       **  *  *  *         ** *  *  * **   *      * **     *:
7nup_A_1     633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732
SecStr          :EEETTTHHHHHHHHHHTT TTS HHHHHHHHHHHHHHHTTTSS HHHHHHHGGGGGG   HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHSHH:    
ExpBur          :bbbeeebbeebbebbeeebeebeeebbbbbbbbbbbbbbbeebebebbbebbebbeebebbbbbbbbbebbbebbbbbeeeebeebbebbbebbbeebee:    

queryA       729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828
                :           *        *          **      *      ** ****      *       **           *    **        *  * :
7nup_A_1     733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824
SecStr          :HH-----HH  SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S   GGGHHHHH--HHHTTSHHHHHHHHHHHHH S HHHHHHH:    
ExpBur          :bb-----eebeebe-eeebbebbbbeebbebbbebebeebbeebeebbeebeeeeeeeebebbbbebbb--bbbbeeeebbebbbebbeebebbbbeebb:    
Contact         :           b                                                                                        

queryA       829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928
                :  **  **    *            *  *        *     ** * ****  **  *      **      *   *  **    **    *    *  :
7nup_A_1     825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924
SecStr          :HHHHHT   HHHHHHHHHHHHHSSSS GGGHHHHHHHHHHSSTTHHHHHHHHHHTHHHHHHHS TTSHHHHHHHHHHHTT  SHHHHHHHHHHHHHHHHS:    
ExpBur          :bebbbbbeeeebbeebbebbbeeeebebbebbebbeebbebeebbebbbebbeeebeebeeebebbbebbbbbbebbbebbbbeebbeebeebbeebeee:    

queryA       929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967
                :  **        **    ****   *      *   *  :
7nup_A_1     925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961
SecStr          :--S   THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :--ebebebbebbbebbebbbebbeebbeebeebbeebee:

Protein Model on 7nup_A_1_IA_1 (TEMPLATE: 7nup )

Input Residue Numbers for Focused Sites