[pdbjlvh2]Protein Model on 5mfs_A_1_KA

Protein Model on 5mfs_A_1_KA_1 (TEMPLATE: 5mfs )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [868 aa]	Aminopeptidase N :AMPN_ECOLI
2	b		KA 1 (A)	non-polymer(GOL)	GLYCEROL	384T(R) 415S(V) 418E(D) 419Y(Q) 430N 478S(E) (identity: 16.7 %/30.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5mfs_A_1 identity=30.3%

queryA       349:FNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEY-----LGADYAEPTWNLKDLMVLNDVYRV: 443
                :** ***** **        *                ** **  * * ** **   *  * * **            **        *      *      :
5mfs_A_1     279:FNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQ-----: 373
SecStr          : SSSEE  TTEEEEEGGGT   TTT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTH-----:    
ExpBur          :bbbebbbbbbbbbbbbebbbbeeebbbbebbebbbebbbbbbbbbbbbbebbbebbbbbbbbbbbbbbbbbbbbbeeeeebbbbbebbbebbbeb-----:    
Contact         :                                   b                              b  bb               b             

queryA       444:MAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRW: 543
                : * **    **                      * *** * **    * *  *  *   *   *           *  *         *         **:
5mfs_A_1     374:FAEDASPMAHPIRP-----DMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLY---FERHDGSAATCDDFVQAMEDASNVDLSH-----FRRW: 460
SecStr          :HHHHTSTT   SS -----SEESSGGGG  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTEEE HHHHHHHHHHHH    TT-----TTHH:    
ExpBur          :bbbbebebbbbbbb-----eebbbbbbbbbebbbbbbbbbbbbbbebbeeeebbebbeeb---beebeeebbbbeebbebbbebbeeebee-----bbeb:    
Contact         :                                  b                                                                 

queryA       544:TLQMGFPVITV: 554
                :  * * *  **:
5mfs_A_1     461:YSQSGTPIVTV: 471
SecStr          :HH  S  EEEE:    
ExpBur          :bebbbbbbbeb:

Protein Model on 5mfs_A_1_KA_1 (TEMPLATE: 5mfs )

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