Protein Model on 4qhp_A_1_P_1 (TEMPLATE: 4qhp )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [866 aa] Aminopeptidase N :Q9JYV4_NEIMB
2 b P 1 (A) non-polymer(SO4) SULFATE ION 423D(R) (identity: 0.0 %/28.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4qhp_A_1 identity=28.9%
queryA       344:IGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASY--VEYLGADYAEPTWNLKDLMVLNDVY: 441
                :    *** ** ** **        * *         *    *  **  * * ** **   *  * * **       *  *               *    :
4qhp_A_1     252:VAVGDFNUGAUENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQ--: 349
SecStr          :EEESS SSSEE  TTEEEEEGGGT   TTT  HHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHH--:    
ExpBur          :bbbeebbebbbbbbbbbbbbbeebbbebebbbbebbbbbbeebbbbbbbbbbbbebbbebbbbbbbbbbbbbbbbbbbbbeebeeebbbbebbeebbb--:    
Contact         :                                                                                 b                  

queryA       442:RVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMN: 541
                :     **    **      *               * *** * *     * *  *  *   *   *           *          * *     *   :
4qhp_A_1     350:HQFPEDAGPTAHPVRPASYE-----EUNNFYTUTVYEKGAEVVRUYHTLLGEEGFQKGUKLY---FQRHDGQAVTCDDFRAAUADANGINL-----DQFA: 436
SecStr          :HHHHHHHSTT   SS SEES----- GGGG SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTT EE HHHHHHHHHHHHT   -----GGGG:    
ExpBur          :ebbebbeebbbbbbbbeebe-----bbbbbbbebbbbbbbbbbbbbbbebeeebbbebbeeb---beebeeebbbbeebbebbbeeeeeeb-----eebb:    

queryA       542:RWTLQMGFPVITVD: 555
                : *  * * **    :
4qhp_A_1     437:LWYSQAGTPVLEAE: 450
SecStr          :HHHH  S  EEEEE:    
ExpBur          :ebbbbbbbbebebe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123