[pdbjlvh2]Protein Model on 4gaa_B_1_A

Protein Model on 4gaa_B_1_A_1 (TEMPLATE: 4gaa )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [605 aa]	MGC78867 protein :Q6IP81_XENLA
2	b		A 1 (A)	polymer(polypeptide(L)) [606 aa]	MGC78867 protein :Q6IP81_XENLA	232E(T) 234N(Y) 236T(Q) 252K(D) 268E(R) 272T(N) 323P 327F(Y) 505H(Q) 506T(M) 509Y(F) (identity: 9.1 %/32.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4gaa_B_1 identity=32.1%

queryA       210:TQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWAR----: 305
                : * **   *   ** * *  *         ** * **   *  *       * *     *        ** *  *            *    **      :
4gaa_B_1     130:SQCQATHCRSIIPCQDTPSVKFTYYSQVSVPKELMALMSALRDGELSE-QSDSNRKIYRFKQNVPIPSYLIALVVGALE----GRKVGPRTTIWTEKELL: 224
SecStr          :E  TTT GGGTS B  STT EEEEEEEEE  SSSEEEESSEEEEEE  -SSS S  EEEEEEEEEEEGGG  EEEES E----EEEEETTEEEEE HHHH:    
ExpBur          :bbbbbbbbbbbbbbbbbbbbbbebbbebbbeeebbbbbbbeeeeeeee-eeeeebebbebebebebbbbbbbbbbbbbe----eeeebebbebbbbeeeb:    
Contact         :                      b b b               b               b   b                                     

queryA       306:-PSAIAAGHGD----YALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVT: 400
                : **            **    **      * **    **       * *  * ***  * *      *                *****  * * *****:
4gaa_B_1     225:EPSVYEFAETEKMLKYAEDLAGP---YVWGQYDL-LILP-------PSFPYGGMENPCL-TFVTPTVL--------AGDRSLASVIAHEISHSWTGNLVT: 304
SecStr          :HHHHHHTTTHHHHHHHHHHHH  ---  SS  EE-EE  -------TT SSSEE  TTE-EEE GGG -------- SSSTTTHHHHHHHHHTTBTTTBE:    
ExpBur          :eebbebbeebbebbeebeebbee---bebeebbb-bbbb-------ebbbbbbbbbbbb-bbbbbbbe--------eeeebbbbbbbbbbbbbbbbbbbb:    
Contact         :                      b   b                                                                         

queryA       401:IEWWNDLWLNEGFASYVEYL--GADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFL-SEDVFK: 497
                : * *   *****   * *    *  * *     * *           *       **                *    * **   *  *   *     * :
4gaa_B_1     305:NETWENFWLNEGHTVYLERRIDGRLYGEEFRQFKALGGWKELQN--SVNTFGATNPLTNLVPNLHE-VDVDAAFSSVPYEKGFALLFYLEQLLGGPEIFL: 401
SecStr          :ESSGGGTHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHH--HHHHH TT GGGSSS   TT-  TTTT  SHHHHHHHHHHHHHHHHHT HHHHH:    
ExpBur          :bebbebbbbbbbbbbbbbbbbbbebeeeebbbbbbbebbeebeb--bbeeeeeeeeebbbbbebee-eebbebebebbebbbbbbbbbbbeebebbeebb:    

queryA       498:QGLASYLHTFAYQN: 511
                :  * **   **   :
4gaa_B_1     402:GFLKSYIQMFAFKS: 415
SecStr          :HHHHHHHHHHTTSE:    
ExpBur          :ebbeebbeebbeeb:    
Contact         :       bb  b

Protein Model on 4gaa_B_1_A_1 (TEMPLATE: 4gaa )

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