[pdbjlvh2]Protein Model on 4gaa_A_1_D

Protein Model on 4gaa_A_1_D_1 (TEMPLATE: 4gaa )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [606 aa]	MGC78867 protein :Q6IP81_XENLA
2	b		D 1 (A)	non-polymer(BES)	2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID	211Q 213Q 214A 351A(Y) 352G 353A(G) 354M 355E 385V 388H 389E 392H 407L(F) 411E 472F 477Y (identity: 81.2 %/32.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4gaa_A_1 identity=32.1%

queryA       210:TQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWAR----: 305
                : * **   *   ** * *  *         ** * **   *  *       * *     *        ** *  *            *    **      :
4gaa_A_1     130:SQCQATHCRSIIPCQDTPSVKFTYYSQVSVPKELMALMSALRDGELSE-QSDSNRKIYRFKQNVPIPSYLIALVVGALE----GRKVGPRTTIWTEKELL: 224
SecStr          :E  TTTTGGGTS B  STT EEEEEEEEEEETTSEEEESSEEEEEEE -SS TTEEEEEEEEEEEEEGGG  EEEES E----EEEEETTEEEEE HHHH:    
ExpBur          :bbbbbbbbbbbbbbbbbbbbbbbbbbebbbbeebbbbbbbeeeeeeeb-eeeeebebbebebebebbbbbbbbbbbebe----eeeebeebbbbbbeeeb:    
Contact         : b bb                                                                                               

queryA       306:-PSAIAAGHGD----YALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVT: 400
                : **            **    **      * **    **       * *  * ***  *       *  *              *****  * * *****:
4gaa_A_1     225:EPSVYEFAETEKMLKYAEDLAGP---YVWGQYDL-LILP-------PSFPYGGMENPCLTFVTPTVLAGD---------RSLASVIAHEISHSWTGNLVT: 304
SecStr          :HHHHHHTTTHHHHHHHHHHHH  ---  SS  EE-EE  -------TT SSSEE  TTEEEE GGG  SS---------STTTHHHHHHHHHTTBTTTBE:    
ExpBur          :eebeebbeebbebbeebeebbee---bebebbbb-bbbb-------ebbbbbbbbbbbbbbbbbbbeeee---------ebbbbbbbbbbbbbbbbbbbb:    
Contact         :                                                  bbbbb                             b  bb  b        

queryA       401:IEWWNDLWLNEGFASYVEYL--GADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFL-SEDVFK: 497
                : * *   *****   * *    *  * *     * *           *       **                *    * **   *  *   *     * :
4gaa_A_1     305:NETWENFWLNEGHTVYLERRIDGRLYGEEFRQFKALGGWKELQN--SVNTFGATNPLTNLVPNLHE-VDVDAAFSSVPYEKGFALLFYLEQLLGGPEIFL: 401
SecStr          :ESSGGGHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHH--HHHHH TT GGGSSS   TT-  TTTT  SHHHHHHHHHHHHHHHHHT HHHHH:    
ExpBur          :bebbebbbbbbbbbbbbbbbbbbeeeeeebbbbbbbebbebbeb--bbeeeeeeeebbbbbbebee-ebbbebebebbbbbbbbbbbbbbeebeeeeebb:    
Contact         :      b   b                                                              b    b                     

queryA       498:QGLASYLHTFAYQN: 511
                :  * **   **   :
4gaa_A_1     402:GFLKSYIQMFAFKS: 415
SecStr          :HHHHHHHHHHTTSE:    
ExpBur          :ebbeebbeebeeeb:

Protein Model on 4gaa_A_1_D_1 (TEMPLATE: 4gaa )

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