[pdbjlvh2]Protein Model on 3se6_A_1_J

Protein Model on 3se6_A_1_J_1 (TEMPLATE: 3se6 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [869 aa]	Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN
2	b		J 1 (A)	non-polymer(MES)	2-(N-MORPHOLINO)-ETHANESULFONIC ACID	350N(A) 351A(P) 352G 472F 473D 474A(E) 477Y 896F(Y) (identity: 50.0 %/36.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3se6_A_1 identity=36.1%

queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLSQGHRVVLRGVGGSQP----PDIDKTELVEPTEYLV: 163
                :*   ***    *  *     * **  *     *  *         **  ** *** *   * **           *        *      *  * * * :
3se6_A_1      64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEXXXYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157
SecStr          :   SS  TTEEEEEEEEEEEEETTTTE-----EEEEEEEEEEESS  SEEEEE SS EEEEEEEEE  ---  SS EE EEEEEGGGTEEEEE S-S   :    
ExpBur          :eeeeebbeebebebbebbbebebeeee-----bebebebebebeeebeebbbbbeebeeeebebebee---eeeeeeebeebeeeeebbbbbeee-eebe:    

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259
                : ***        *     *   * *   *** * *   *      * *      **  *******  ** * *         ***** **     *    :
3se6_A_1     158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248
SecStr          :TT  --------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B  STT  BEEEEEEEE TT EEEESS- EEEEEE TTS :    
ExpBur          :eeee--------bebbbebeeebeeebbbbbebebebeeeeeeebbbbbbbbbbbbebbbbbbbbebbbebbbebebeeebebbbbb-beeeeeebeeee:    

queryA       260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358
                : **       * ** ****** * **  *       * **   * * *      *  ***      * *     *  *** * * *  ***  *******:
3se6_A_1     249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340
SecStr          :EEE------EE    SB GGG  EEEE  EEEEEE TT  EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT    SSEEEEEEESS SSSEE  TT:    
ExpBur          :bbb------bbeebeebbbbbbbbbbbebeebebebeeebebbbbbbbebeebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbb:    
Contact         :                                                                                           bbb      

queryA       359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458
                :* **** ******  ** * *  *  **************** ***** ******* * *        *     *   **    *   * * ** * * *:
3se6_A_1     341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439
SecStr          :EEEEEGGGT   TTT  HHHHHHHHHHHHHHHGGGTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHTTTTSTT   SS  :    
ExpBur          :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee:    

queryA       459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538
                :*    ** ** * **  ** ***  * **  ** *  *  *   **  * * *     **  *                                  *  :
3se6_A_1     440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXLGENAEVKE: 536
SecStr          : --- SHHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHH  -------------------------      HHH:    
ExpBur          :b---eeeeebbbbbbebbebbbbbbbbbbbeebeeeebeebbbebbeebeeebbebebbbbbbbee-------------------------eeeeeebee:    
Contact         :             bbb  b                                                                                 

queryA       539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFL--LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNY: 634
                : *  **** * *   *  *     * ** **                * *  * *                     *       **  *    *** * *:
3se6_A_1     537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGXXXXXXXXXXXQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYIVHY: 635
SecStr          :HHHHHHHS S EEEEEEEETTEEEEEEEE    -----------  S      EEEEESS    EEE   SSE-EEEE SS  S EEESGGG SS EEEE:    
ExpBur          :bbebbbebebbbbbbbeeeeeebebebebbebe-----------eeebebbbbbbbbbeeeeeeeeeebeeee-eebebeeebebbbbbbbbebbbbbbb:    

queryA       635:DEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTPLFI: 731
                :    *    ***   *       *   * * * *  *       **  *  *  *         ** *  *  * **   *      * **     *   :
3se6_A_1     636:EGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVI-: 734
SecStr          :ETTHHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHTTGGGT   HHHHHHHHHHHHHHHHHHHHS  HHHHHHHHHHHHHTTHHHH-:    
ExpBur          :eeebbeebbebbeeebeebeebbbbbbbbbbbbbbebeebebeebbebbebbeebebbbbbebbbebbbebbebbeeeebeebbebbbebbbebbbebb-:    

queryA       732:HFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAA: 831
                :        *        *          **      *      ** ****      *       **           *    **        *  *   *:
3se6_A_1     735:----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKILYA: 827
SecStr          :----HH  SS - S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S   HHHHHHHH--HHHTTSHHHHHHHHHHHHH S HHHHHHHHHH:    
ExpBur          :----eebebbe-eeebbeebbbeebbebbbebeeeebeeebeebbeebeeeeeeeebebbbbebbb--bbbbeeeebbebbbebbeebbbbbbbebbbeb:    

queryA       832:LACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFG: 931
                :*  **    *            *  *        *     ** * ****  **  *      **      *   *  **    **    *    *    *:
3se6_A_1     828:LSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ--G: 925
SecStr          :HTT   HHHHHHHHHHHHH SSS GGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHS TTSHHHHHHHHTTTTT  SHHHHHHHHHHHHHS SS--S:    
ExpBur          :bbbbeeeebbeebbebbbeeeebbbbbbbebbeebbebeebeebbbebbeeebeebbeebebbbebbbbbbebbbebbbbeebbeebeebbeebeee--b:    
Contact         :                                                                b                                   

queryA       932:SGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967
                :*        **    ****   *      *   *  :
3se6_A_1     926:SHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961
SecStr          :   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH :    
ExpBur          :eebebbebbbbebebebebbeebbeebeebbeeeee:

Protein Model on 3se6_A_1_J_1 (TEMPLATE: 3se6 )

Input Residue Numbers for Focused Sites