[pdbjlvh2]Protein Model on 2xpy_A_1_B

Protein Model on 2xpy_A_1_B_1 (TEMPLATE: 2xpy )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [628 aa]	LEUKOTRIENE A-4 HYDROLASE :LKHA4_YEAST
2	b		B 1 (A)	non-polymer(GOL)	GLYCEROL	311A(D) 374S(H) (identity: 0.0 %/30.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2xpy_A_1 identity=30.8%

queryA       210:TQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDP--NWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPS: 307
                : *  *  **  ***** *  *  *      *         **   *    *      *   *        **              *  *        * :
2xpy_A_1     144:SQLEAIHARSLFPCFDTPSVKSTFTASIESP---------LPVVFSGIRIEXXXXDTNIYRFEQKVPIPAYLIGIASGDL----SSAPIGPRSTVYTEPF: 230
SecStr          :E  TTTTGGGTS B  STT  EEEEEEEE S---------S EEESSEE  ---- TTEEEEEEEEEE GGG  EEEES ----EEEEEETTEEEEE HH:    
ExpBur          :bbbbbbbbbbbbbbbbbbbbbbebebbbebe---------bebbbbbeeee----eeeebebebebebbbbbbbbbbbeb----eebebeebbebebbee:    

queryA       308:AIAAGHGDYALNVTG-------PILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVT: 400
                :            *          *     * **                  * **     *     *         **      ******** * *****:
2xpy_A_1     231:RLKDCQWEFENDVEKFIQTAEKIIFEYEWGTYDI--------LVNVDSYPYGGMESPNM-TFATPTLI----AHDRSN----IDVIAHELAHSWSGNLVT: 313
SecStr          :HHHHHHHHHHTTHHHHHHHHHHHS    SS   E--------EE  TT  S EE  TT -EEE GGG ---- SSSTT---- TTHHHHHHHTTBTTTEE:    
ExpBur          :bbeebeebbeebbbebbebbbebbeebebeebbb--------bbbbbbbbeeebbbbbb-bbbbbbbb----beeeeb----beebbbbbbbbbbbbbbb:    
Contact         :   b                                                                     b                          

queryA       401:IEWWNDLWLNEGFASYVE--YLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLS------: 492
                :   **  *****   * *    **   ***     *    *       *        **     *        *    * **   *  *   *       :
2xpy_A_1     314:NCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQN--SIDSMKDPERFSTLVQNLNDNTDPDDAFSTVPYEKGFNLLFHLETILGGKAEFD: 411
SecStr          :ESSGGGTHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHH--HHHT SSHHHHTSSS   GGGS GGGG SSHHHHHHHHHHHHHHHHTTSHHHHH:    
ExpBur          :bbbbbbbbbbbbbbbbbbbbbbbeeeeeebbbbbbbebbeebee--bbeebeeeeebbbbbbebeeebebeebebebbebbbbbbbbebbeebeeeeebb:    

queryA       493:---EDVFKQGLASYLHTFAYQNTIY: 514
                :      **      * **    * *:
2xpy_A_1     412:PFIRHYFKKFAKKSLDTFQFLDTLY: 436
SecStr          :HHHHHHHHHTTTEEE HHHHHHHHH:    
ExpBur          :ebbeebbeebeeebbbbbbbbebbb:

Protein Model on 2xpy_A_1_B_1 (TEMPLATE: 2xpy )

Input Residue Numbers for Focused Sites